| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1552 |
|---|
| Symbol | |
|---|
| ID | 4693264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1739010 |
|---|
| End bp | 1739720 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639849316 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_996329 |
|---|
| Protein GI | 121608522 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00413964 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CCGACGACGC CGCAGCCTTC CTGGCCCTGC AAGCGGTGAC CACTGCCACC
TTGACCACCG TGCTGCTGAA AAAAGGGCTG CGCAATGTCT GGATTCGCGG CGCCTTGCCG
ATCACGCCGC AGGCGCAGCG CTGCGTCGGC CGGGCGTTCA CGCTGCGCTT CATTCCGGCC
CGCGAAGACC TGGCCACCCC CGAATCCTGG AGCTCGCCCC AGTCCACGCG CGCCGCGATC
GAGCAAATGC CGCCAGGCTG CATCGCCGTG GTCGATGCCA ATGGCGTGCG CGACGCCGGC
TTCTGGGGCG ACATCCTGTG CGCGCGCATG GCCCGCAAAG GCGTCGCGGC CCTGGTCAGC
GATGGCGTGG TGCGCGATCT GGCGGGCGTG CTGTCCACCG GCTTGCCGAT CTGGGCCGCA
GGCACGGCCG CCCCGCCCTC GGTCGCCGCG CTGACCTTCG TGGCCTGGCA ACAGCCCGTG
GGCTGCGGCG GCGTGGCGGT ATTTCCCGAT GACGTGATCG TCGCCGACCG GGATGGCGCG
GTGCTCATCC CCGCAGCGCT GCTCGGCGAG GTCGCGGCGC AGGCCACCGA GCAAGAGCGG
CTGGAAGACT GGATCATGCA GCAGGTCCAA TCCGGCGCCG CGCTGCCCGG ACTGTATCCG
CCCGACGCCG GCAACAAGGC GCGCTACGAA GCCGGCAAGG CCGCGCCCTG A
|
|---|
| Protein sequence | MTAPDDAAAF LALQAVTTAT LTTVLLKKGL RNVWIRGALP ITPQAQRCVG RAFTLRFIPA
REDLATPESW SSPQSTRAAI EQMPPGCIAV VDANGVRDAG FWGDILCARM ARKGVAALVS
DGVVRDLAGV LSTGLPIWAA GTAAPPSVAA LTFVAWQQPV GCGGVAVFPD DVIVADRDGA
VLIPAALLGE VAAQATEQER LEDWIMQQVQ SGAALPGLYP PDAGNKARYE AGKAAP
|
|---|
| |