| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1542 |
|---|
| Symbol | |
|---|
| ID | 4690662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1728337 |
|---|
| End bp | 1729071 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639849306 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_996319 |
|---|
| Protein GI | 121608512 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.408327 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0313462 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACTGC AGACCGTAGA ACCCCAACGC CTGTATCGCC AGATCGCCGA GCAGTTGCGC
GCCCTGATCG CCCAGGGCGC ATTCGACGCC GGTGCGCGGC TGCCTGCCGA GCGCGACCTG
GCCCAACGAC TGGGCGTGAG CCGGCCGTCG GTGCGCGAGG CGCTGATCGC GCTGGAGGTC
GAGGACTGGG TGGAGGTGCG CATCGGCTCG GGCGTGTACG TGCTCGACCG CGCGCGCCGG
CCCGTGGCGT CTGCCGAGGC CGTGGCGCCG TCCGGGGCCG TGGCGCCCTC GGAGTGGGGG
CCGCTGGAAC TGATCCGCGC GCGCCGCGTG GTCGAGGGCG AGACTGCCGC CATCGCCGCC
CGCTGCGGCA AGCGCAAGGA TGTGGACGCG ATGTCGCGCG CCATCGCCTC GATGCACGAA
CAGGCCGAGC GCCGGGTTGC GCCGCTGGAC GGCGACCGCG CCTTTCACCT GGCCATCGCC
GGCGCCAGTG GCAATACGGT GCTGGTGGAG ACGGTGCAGG GCTTTTGGGA TTCGCGCCAG
GGGCCGATCT TCATGCGGCT TGGCGGCTAT TTCGAGACCG TGACCTCTTG GCGCGTCGCC
ATTGCCGAGC ACGAAGCCAT CCGCGACGCG ATCGCCGCGC ACGACGCCGG GGCCGCGCGC
GACGCGATGC ACGCGCACAT GGACAAATCG CACCGCCGTT TCAGCGTGAA CTGGCGCCGC
ACCAAGTCGA CCTGA
|
|---|
| Protein sequence | MPLQTVEPQR LYRQIAEQLR ALIAQGAFDA GARLPAERDL AQRLGVSRPS VREALIALEV
EDWVEVRIGS GVYVLDRARR PVASAEAVAP SGAVAPSEWG PLELIRARRV VEGETAAIAA
RCGKRKDVDA MSRAIASMHE QAERRVAPLD GDRAFHLAIA GASGNTVLVE TVQGFWDSRQ
GPIFMRLGGY FETVTSWRVA IAEHEAIRDA IAAHDAGAAR DAMHAHMDKS HRRFSVNWRR
TKST
|
|---|
| |