| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1538 |
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| Symbol | |
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| ID | 4691722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1724220 |
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| End bp | 1725620 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639849302 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_996315 |
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| Protein GI | 121608508 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.321588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0774583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA TCATCTTCCT GTTCTTCATG GCCGGCGGCG TTCCGGTGGC CATCGCCATG
GCGGGCGCCG CGCTGGTCTA CATCCTGACG AGCGACAGCC AGCCGCTGCC GCCGTTCGTG
GTCATCCACC GCATGGTCAG CGGCATCGAC AGCTTTCCGC TGCTGGCCGT GCCGTTTTTC
ATCCTGACCG GCAACCTGAT GAACAGCGCC GGCATCACCA CGCGCATCTA CAACTTCGCG
CTGGCGCTGG TCGGCTGGCT CAAGGGCGGC CTCGGGCATG TGAACGTGCT CGGGTCGGTG
ATCATGGCGG GCATGAGCGG CACGGCCATT GCCGACGCGG CCGGCCTGGG CACCATCGAG
ATCAAGGCCA TGAAGGAGCA TGGCTATTCC ACCGAGTTCG CCGTCGGCGT GACGGCGGCC
TCGGCCACGC TGGGCCCGAT CATCCCGCCG AGCCTGCCGT TCGTGATCTA CGGGATGATG
GCCAATGTGT CGGTCGGGGC GCTGTTCCTG GCGGGCCTGC TGCCCGGCGC GTTGCTGGCC
ATCCTGATGA TGCTCACGGT GGCCTACTAC GCGCACAAGA ACCGCTGGGG CGCGGACGTG
CAGTTCTCGC GCACGCGGCT GTTCAAGGCG CTGGCGGAGC TGCTCGTGGT GATCGGCTGG
CCCCTTTTGC TGTGGCTGCT GGTGGTCAGG CTCGGCACGC CGGCGCAGTT GACGGTGTTC
GCCGGGCTGG CCTGCCTTTT CGTGCTCGAC AAGCTGTTCG ACTTCCAGGC GCTGCTGCCC
ATCATGACGC CGGTGCTGCT GATCGGCGGC ATGACCACCG GCTTGTTCAC CCCCACCGAA
GGCGCGATCG CGGCCTGCGT GTGGGCCATG ATCCTGGGCT TTGCCTGGTA CCGCACGCTG
TCGTGGAAGA TGTTCATCAG GGTCTGCCTG GACACCATAG AGACCACGAG CACGGTGCTG
CTGATCGTCG CGGCGGCATC GATCTTCGGC TGGATGCTCA CCGTCACCGG CGTGACGACC
GACATCGCCG CCTGGGTGCT CGCCTTCACC CAGGAGCCGT GGGTGTTCCT GCTGCTGGCC
AACCTGCTGA TGCTCTTCGT GGGCTGCTTT CTGGAGCCGA CGGCGGCCAT CACCATCCTG
GTGCCGATCC TGCTGCCGAT CGCCAGCACG CTCGGCATCG ACCCGATCCA CTTCGGCCTG
GTGATGGTGC TGAACCTGAT GATCGGCCTG CTGCACCCGC CGATGGGCAT GGTGCTGTTC
GTGCTGGCGC GGATCTCGGG CCTGAGCCTG GAGCGCACGA CGATGGCCAT CCTGCCCTGG
CTGATACCGC TGCTGCTGAG CCTGGGCGTG ATCACCTACA TACCCAAGAT CGTGCTCTGG
ATTCCGAAGA TGTTTTATTG A
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| Protein sequence | MLKIIFLFFM AGGVPVAIAM AGAALVYILT SDSQPLPPFV VIHRMVSGID SFPLLAVPFF
ILTGNLMNSA GITTRIYNFA LALVGWLKGG LGHVNVLGSV IMAGMSGTAI ADAAGLGTIE
IKAMKEHGYS TEFAVGVTAA SATLGPIIPP SLPFVIYGMM ANVSVGALFL AGLLPGALLA
ILMMLTVAYY AHKNRWGADV QFSRTRLFKA LAELLVVIGW PLLLWLLVVR LGTPAQLTVF
AGLACLFVLD KLFDFQALLP IMTPVLLIGG MTTGLFTPTE GAIAACVWAM ILGFAWYRTL
SWKMFIRVCL DTIETTSTVL LIVAAASIFG WMLTVTGVTT DIAAWVLAFT QEPWVFLLLA
NLLMLFVGCF LEPTAAITIL VPILLPIAST LGIDPIHFGL VMVLNLMIGL LHPPMGMVLF
VLARISGLSL ERTTMAILPW LIPLLLSLGV ITYIPKIVLW IPKMFY
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