Gene Veis_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1537 
Symbol 
ID4692230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1722676 
End bp1724217 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content69% 
IMG OID639849301 
ProductAltronate dehydratase 
Protein accessionYP_996314 
Protein GI121608507 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2721] Altronate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC CCATGATGAC TACCTGCATC CGCCTGCATC CCGCCGACGA CGTCGTCATC 
GCGCGCGCCC AACTCCTCGG CGGCAGCCGC GTCGAGCAGG TGAGCGTGCG CGGCCTGATC
CCGCCGGGCC ACAAGATCGC GATGCGCGCC ATCGCGCAGG GCGAGCCGGT GCGCCGCTAC
AACCAGATCA TCGGTTTCGC AAGCCGCCCC ATTGCGGCCG GCGAGCATGT GCACACCCAC
AACCTGGACA TGGGCCCGGA CAAGGGCCGG TTCGAGCGCG ACTACGCCTT CGGCGCCGAT
GTCAAGCCCG CGCCCGCCAG GCGCCAGGCC AGTTTCATGG GCATACGGCG CGCCGACGGC
CGCGTGGCCA CGCGCAACTA CCTTGCCGTG CTGACCAGCG TGAACTGCTC GGCCACCGTC
GCGCGCGCCA TTGCCGATCA TTTCTCGCGC CACACCAACC CGCAAGCGCT GGCGGCGTTT
GCCAACGTCG ACGGCGTGAT CGCGCTGACC CACGGCAGCG GCTGCGGCAT GGACCAGCAG
GGCCTGGGCA TGCAGCTTCT CACGCGCACG CTCACCGGCT ACGCCAGGCA CCCGAACTGC
GCCGGCGTGC TGCTCGTCGG GCTGGGCTGC GAGGCCAACC AGATCAGCCG CTGGCTGGCC
ACGGGCCAGT TGGTCGAAGG CGAGAACCTG CGCAGCTTCA ACATCCAGGA GCAGGGCGGC
ACGCGCCGGG CGATAGACCA GGGCGTGGCG CTGATCGAGG CGATGCTGCC GCGCGCCAAC
GCCGTCCAGC GCGAGCCTTG CAGCGCGGCG CACATCACGA TCGGGCTGCA ATGCGGCGGC
TCCGACGGCT ACTCGGGCAT CAGCGCCAAC CCGGCGCTGG GCGCGGCGGT GGACCTGCTG
GTGGCGCATG GCGGCAGCGC CATCCTCAGC GAGACGCCCG AGGTGTACGG CGCCGAGCAC
CTGCTCACGC GCCGCGCCGT CAAGCCCGAA GTGGGCCGGA AACTGGTCGA GCGCATCAAA
TGGTGGGAGC ACTACACGGC CATCCACCAA GGCGAGATGA ACAACAACCC CTCGCCGGGC
AACAAGGCGG GCGGCCTGAC CACGATCCTG GAAAAGTCGC TCGGCGCGGT CGCCAAGGGC
GGCACCAGCA ACCTGGAGGC GGTGTACGAA TACGCCGAGC CGGTCACGCA GCACGGCCTG
GTCTACATGG ACACACCGGG CTACGACCCG GTCAGCGCCA CCGGCCAGGT GGCCGGCGGG
GCCAACCTGA TCTGCTTTAC CACGGGGCGC GGCTCGGCCT ACGGCTGCGC GCCCTCGCCC
TCGCTCAAGC TCGCCACCAA CTCGGCGCTG TGGCAGCGGC AGCAGGAGGA CATGGACATC
AACTGCGGCG AGATCATCGA CGGCCAGACC ACGATAGCGG CCATGGGTCA GCGCATCTTC
GAGCAGGTGC TGGCCACGGC CTCGGGCGCG CAGACCAAGA GCGAGCAGCA TGGCTATGGC
CAAAACGAGT TCGTCCCCTG GCAGGTCGGC GCCGTGATGT AG
 
Protein sequence
MNRPMMTTCI RLHPADDVVI ARAQLLGGSR VEQVSVRGLI PPGHKIAMRA IAQGEPVRRY 
NQIIGFASRP IAAGEHVHTH NLDMGPDKGR FERDYAFGAD VKPAPARRQA SFMGIRRADG
RVATRNYLAV LTSVNCSATV ARAIADHFSR HTNPQALAAF ANVDGVIALT HGSGCGMDQQ
GLGMQLLTRT LTGYARHPNC AGVLLVGLGC EANQISRWLA TGQLVEGENL RSFNIQEQGG
TRRAIDQGVA LIEAMLPRAN AVQREPCSAA HITIGLQCGG SDGYSGISAN PALGAAVDLL
VAHGGSAILS ETPEVYGAEH LLTRRAVKPE VGRKLVERIK WWEHYTAIHQ GEMNNNPSPG
NKAGGLTTIL EKSLGAVAKG GTSNLEAVYE YAEPVTQHGL VYMDTPGYDP VSATGQVAGG
ANLICFTTGR GSAYGCAPSP SLKLATNSAL WQRQQEDMDI NCGEIIDGQT TIAAMGQRIF
EQVLATASGA QTKSEQHGYG QNEFVPWQVG AVM