Gene Veis_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1524 
Symbol 
ID4692134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1707587 
End bp1709920 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content65% 
IMG OID639849289 
Productouter membrane protein 
Protein accessionYP_996302 
Protein GI121608495 
COG category 
COG ID 
TIGRFAM ID[TIGR02059] cyanobacterial long protein repeat 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.312083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTC AGCTCCAGAT GCTCATCTCA GACACTGACC TCACAGTCGG CGAAGTAATG 
TACGTCACCT TCGATACCGA GCACTCCCGG GAGATTCGCG TCATGGGAGG ACACGTGAAC
CTGGATTACG TCGAGGGGTT GAGCGTAGAG AATGCCAATG GCACGATGGA CATAGCGAGT
TGGCGCCAGC CGGCGGGCAA GTGGGTCGGC ACCTTCCGCC CCAACGCGGG CGTGGAGGCC
ACCGGCTGCT ACCTGCGCTA CACCGCCCCC GCCAAGCAGG TATGGTCGCC GGGCGACAAC
GCCATGATCG ACATCCCTGC CAGGGATATC CGCAGCCCGC TCTTCAACAT CGACACCAAG
CCGCCCACCA TCCTGGCCGC CGAAACCCGC AGCACCGACA CCAGCCTGAC CGCCAACGAA
ACAAACACCG TCACCTTCAA ATTCCACGAG CGGGTCGTGG GCTTTGACAG AAATGACCTG
GCGATAGAGG GCACGGGCGA GATCACCAAC CTGCAGTCCA CCGACGGAGG CACCACTTGG
CAGGTCACCG TGCGGGCACC GGCCAATATG GCGGCAAACA CCGTCGCCAG GGGCAACCAG
ATCAAAATAG CCATGTCCGG CATCAAAGAT GCCAAGGGCA ACGAAGGCGT GGGGATCCAA
ACCATCGCCA CCTACGACAT CGACAGCAAG GCGCCCAGCG CCACCATCGC CGTCACACCC
AACCCCGTCA CGAACAACAA CGACAGACTG GTCACCGTTA CCATCACCTT CGACGAGGAA
GTCACCGGCT TCACGGCAAA CAACATCGAT TTCAGCAACG CCAATGTCGG TGCCCGTCCC
GGCGCCGACC GGACAGGAGC GCTGGTCCGC TCAACCGACG GCCGCACCTA CACCATCACC
TACACGGCCG CTGCGGACAC CGAGGATGCC ACCAACACCA TCAGCCTGCT CAACCTCAAC
ACCATTCGTG ACACCGCAGG CAACGCCGCA ACGGTCAACC CCACCAGCAA CAACTTCGAG
ATCGACACCC GGGCGCCCAC GGTCACGGTC GCGATGGACA AAGAGCGCCT GACCGCTGGC
GAAACCGCCA CCGTCACTTT CACCTTCAGC GAGACCGTTA CCGGCTTCAG CGACGCTTCC
ATCGTCGTGG ATGGCGCCAA CGGCACTCTG GGCAACCTGA CGCAGGACAC AGCCGACGGC
AGAATCTGGA GAGGCACTTT CACCCCCACG GCCAGCCTGT CCAACACCCG CAGCCAGATC
AGCCTGAGGA TGGACGGCAT CAGAGACCGC AACGGCAACG CCGCCAGCGC TGCGGGCGCA
GCCCGCAGCT ACACCGTCGA CACCGCCGTC TTTGCCATCA TCAGCGCCAC GGTGAACGGC
AGGCAGTTGG TATTGCAGTA CAGCGATGAA ACCGCGCTGG ACCCGGAGCA GGCACATAAC
GCACCCAACG ATGCGTTTGT GGTGCTGGTC GATGGCGTGC GCAACAACGT CACCGGCGTG
CTCGTGGATG CAGTGGCCAA GACCATCACG CTGACGCTCG ACAGCGCCGT GACCCGGGGC
CAGCAGGTGA GCGTCGCCTA CAACGACCCC AGCACCGGCG ACGACCCGCA AGCGGTGCAA
GAAGCCGGCA CCGGCAACGA CGCGGCCAGT TTCGCGGCCA AACCGGCGAC CAACGTCACC
CCCCCCCCCC CCCCCCCCCC CCCCCCCGCA CCGGATGCAT CGAATGCGCC AGACGCACCG
GACTCCGACC GCGACGGTGT GCCCAACGAC CAGGAGGACC AGGCCGCCGG TCTGCTGCGC
CCCGATGGCT CGGCCGGCCT GTCTGGTGAT GGCAACGGCG ACGGCATCAA AGACAGCCAG
CAGGCCGCCG TCGCTTCGAC CCGCGACCTG ACCCTGGTGG CCGGCAGCCA GAACGGCAAA
CTGATCCCCG ACAGCAACGC GCGCATTACC GAACTGGTGC GCAACGATGC CCCGGCCAAT
CTGCCCAAGG GCATGGAGAT GCCGATCGGT CTGACCTCAT TCAAGGTATC GCTGGCCGAA
GGCCGCAGCA CCGAGAGCTT CAGCCTGTAC GCAGACCCGG CGCTCGGCGC CAATGGCTAC
TGGGTCAAGA ACAGCACCGG CACCTGGGTG AACCTGGCCA GCGAACCCTA CGGCGGCAAG
GTGGCCAGCG AAGGCGGGCG CACGCGGCTG GACTTTCAGA TCCAGGACGG CGGCGAGTAC
GACGCCGACG GTCAGGTCAA CGGCAGCATC ACCACCCCCG GCGCCGTGGC GAAGATGCCG
CTGTCCATCG TCGGACAGGC GTCGGATGCC CATTCGTCCG GCTTTTGGTA CTGA
 
Protein sequence
MTVQLQMLIS DTDLTVGEVM YVTFDTEHSR EIRVMGGHVN LDYVEGLSVE NANGTMDIAS 
WRQPAGKWVG TFRPNAGVEA TGCYLRYTAP AKQVWSPGDN AMIDIPARDI RSPLFNIDTK
PPTILAAETR STDTSLTANE TNTVTFKFHE RVVGFDRNDL AIEGTGEITN LQSTDGGTTW
QVTVRAPANM AANTVARGNQ IKIAMSGIKD AKGNEGVGIQ TIATYDIDSK APSATIAVTP
NPVTNNNDRL VTVTITFDEE VTGFTANNID FSNANVGARP GADRTGALVR STDGRTYTIT
YTAAADTEDA TNTISLLNLN TIRDTAGNAA TVNPTSNNFE IDTRAPTVTV AMDKERLTAG
ETATVTFTFS ETVTGFSDAS IVVDGANGTL GNLTQDTADG RIWRGTFTPT ASLSNTRSQI
SLRMDGIRDR NGNAASAAGA ARSYTVDTAV FAIISATVNG RQLVLQYSDE TALDPEQAHN
APNDAFVVLV DGVRNNVTGV LVDAVAKTIT LTLDSAVTRG QQVSVAYNDP STGDDPQAVQ
EAGTGNDAAS FAAKPATNVT PPPPPPPPPA PDASNAPDAP DSDRDGVPND QEDQAAGLLR
PDGSAGLSGD GNGDGIKDSQ QAAVASTRDL TLVAGSQNGK LIPDSNARIT ELVRNDAPAN
LPKGMEMPIG LTSFKVSLAE GRSTESFSLY ADPALGANGY WVKNSTGTWV NLASEPYGGK
VASEGGRTRL DFQIQDGGEY DADGQVNGSI TTPGAVAKMP LSIVGQASDA HSSGFWY