Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1520 |
Symbol | |
ID | 4692640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1700671 |
End bp | 1702437 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639849285 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_996298 |
Protein GI | 121608491 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC CCCGAGTCGA TCCGATCACC CTGGCCGTCG TGCGCGGCGC ACTGGAGACC ACGCAGCGCG AGATGACGCT GACGCTGGAG AAGACGGCGC GCTCCAGCGT TTTCAACGTG GCCCACGATT ACAGCAATGC GCTGTTCAAT CACCGCGCCG AGATGATTCT TCAGGGGCAG GACATTCCGA TCCATCTCGG CGGCCTGATG CCGGCGATGA AGGCGGTGGC CGCGTACTTC GGCGACGATA TCCACGAGGG CGATGTGATC TACCACAACG ACCCGGTCCT GATGGGCAGC CATATCCTCG ATTGCTGCAT GTACAAGCCC ATCTTCCATC AGGGCAAACT GGTCTTTTGG AGCGTTTGCA AAGGGCATGT GACGGACATT GGCGGCCCGG TGCCGGCGGG CTACAACCCC GCAGCCACGG AGATCTACGC CGAGGGCTTG CGCATTCCGC CGGTCAAGCT GTGGGACAAG GGGCGGCCGC GCAACGATGT CATCGGGTTC CTGCTGGCCA ACGTGCGTTC GCGCCGCGAC TGGGAGGGCG ATTTGCGGGC GCAGTTCGGC GCGGTTTCGA TCGGCGAGCG CAATCTGCTG GCATTGCTCG CCAAGTACGG CGTGAGCGAA GTGCAGTCAT GCGTCGACGA GTTGCTCGAC ATGGCCGAGC GTTCCATGCG CGCGCTGTTC GCCTCGATTC CTGACGGCAG CCATGAGGCC AGCGCGGTGC TCGAAGATGC CGGTCACGGC CTGGGGGAAC TGCGCATCGG GGCCCGGGTG ACGATCGAGG GCGAGCACTG CCACATCCGC ATCGACAGCC CGCCGCAGGT GCCTTACTTC ATCAACAGTT ACGCGGGCAA CTCGCATTCA GGCGTGTACC TGGGTCTGAT GATGTTTGCC AAAGTCGCGC CGCCGTACAA CGAGGGGCTG TACCGCTGCA TCACGCTCGA CCTGGGCCCC CAGGGCACGC TGTGCAACGC GGCCGAGCCG GCGCCGCATG TGAACTGCAC CACCACGCCG ATGGAAACGT TGGCCGATGC CGTGCGCCTG GCGCTGGAGC AAGCCGCGCC CGAGCGCGCC GTAGGCTCTT GGTGCCATTC CAGCGGCATC AACATCGCCG GGCGCGACCG GCGCAACGAC GAGGAGTACG TGACCATGGT GCTGGCTTCG CTGATCGGCG GGGCCGGGGC CACGGCGCAT CTGGACGGAT GGAACGCGGT CGGCCCGCAG TGCTGCTTTG GCGCGCTGAC TTCGGGCGAC ATCGAGCTGC TCGAGCACCA GTATCCGATC CTGATCCACC GCTATGGCCT GGTCACGGAC AGCGGTGGCG CGGGCAAGAA CCGTGGCGGC TGCGCCACCG TCTGGGAGGT CGAGCCCATC GACCACGCGA TGACGGTCAT CAGTTTCGGC GAAGGCCGCC ACTATCCGGC ACTGGGGGCG CAGGGGGCGC AGGGGGCGTC GGGTGGGGCA GCGCATGCCG GCTGCAAGCT CGGCCGCATC GAGCGCAAGC AGGGCGACGC AGTGATCGAG GTGCTGCGCA AGAACACCAT CCTCAAGATA GCGCCGGGAG AGCGGGTGGC CACCGTGAAC CCCGGTGGCG GTGGTTGGGG CCCGGCCTTG GAGCGCGAGA TCGGCAAGGT CGTCCATGAC GTGCGCAACG GCTATGTGTC GCTGGCCGCT GCCGAGCAGG AGTACGGCGT GATCGTCGAT GTCGAGCGCT GGACCGGCCG GCGCGCCGGT GCGCGTCACC CGGCGCCCGG CGTCTGA
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Protein sequence | MPKPRVDPIT LAVVRGALET TQREMTLTLE KTARSSVFNV AHDYSNALFN HRAEMILQGQ DIPIHLGGLM PAMKAVAAYF GDDIHEGDVI YHNDPVLMGS HILDCCMYKP IFHQGKLVFW SVCKGHVTDI GGPVPAGYNP AATEIYAEGL RIPPVKLWDK GRPRNDVIGF LLANVRSRRD WEGDLRAQFG AVSIGERNLL ALLAKYGVSE VQSCVDELLD MAERSMRALF ASIPDGSHEA SAVLEDAGHG LGELRIGARV TIEGEHCHIR IDSPPQVPYF INSYAGNSHS GVYLGLMMFA KVAPPYNEGL YRCITLDLGP QGTLCNAAEP APHVNCTTTP METLADAVRL ALEQAAPERA VGSWCHSSGI NIAGRDRRND EEYVTMVLAS LIGGAGATAH LDGWNAVGPQ CCFGALTSGD IELLEHQYPI LIHRYGLVTD SGGAGKNRGG CATVWEVEPI DHAMTVISFG EGRHYPALGA QGAQGASGGA AHAGCKLGRI ERKQGDAVIE VLRKNTILKI APGERVATVN PGGGGWGPAL EREIGKVVHD VRNGYVSLAA AEQEYGVIVD VERWTGRRAG ARHPAPGV
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