| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1502 |
|---|
| Symbol | |
|---|
| ID | 4693474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1678525 |
|---|
| End bp | 1679889 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849267 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_996280 |
|---|
| Protein GI | 121608473 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCG CCCTTGCCGA CAAACTCACG CGCCTCGTCA AGGAGTTGCG TGGCCAGGCC
CGCATCACCG AATCGAACGT GCAGGACATG CTGCGCGAGG TGCGCATGGC CCTGCTCGAA
GCCGATGTGG CCCTGCCCGT GGTGCGCGAT TTCATCGCCC GCGTCAAGGA CAAGGCGCTG
GGCCAGGAGG TGCTGGGCTC GCTCAAGCCC GGCCAGACGC TGGTGGGCAT CGTCAACCGC
GAGCTTGCAG CGACCATGGG CCAGGGCGTG GCCGACATCA ACCTGGCCGC CCAGCCGCCG
GCCGTGATCC TGATGGCCGG TCTGCAGGGC GCCGGCAAGA CCACCACCAC GGCCAAGCTG
GCCAAATACC TGATCGAAAA GCGCAAGAAG AAGGTGCTGA CGGTCTCGGG CGACGTGTAC
CGCCCGGCGG CCATCGAGCA ACTCCAGACG GTGACCCGGC AGGCCGGCGG CGCGTTCTTT
CCCAGCCTGC CTGAGCAAAA GCCGCTGGAC ATCGCCCTGG CCGCGCTCGA CCATGCCAGA
AAGCATTACT TCGACGTGCT GCTGGTCGAC ACCGCCGGCC GGCTGGCCAT AGACCAGGCC
ATGATGGAAG AAATCAAGGC GCTGCACGCG GCGCTGAACC CGGTCGAAAC CCTGTTCGTG
GTCGATGCCA TGCAGGGCCA GGACGCGATC AACACCGCCC GGGCCTTCCG CGAGGCGCTA
CCGCTGACCG GCATCGTGCT GACCAAGCTC GACGGCGACT CGCGCGGCGG CGCGGCGCTG
TCGGTGCGGC AGATCACCGG CGTGCCGATC AAGTTCGCCG GGGTGTCGGA AAAGCTCGAT
GGCCTGGATG TGTTCGATGC CGAGCGCCAT GCCGGGCGCA TCCTGGGCAT GGGCGACATC
GTGGCGCTGG TCGAGCAGGT CACGGCCGGC GTCGACATCG AGGCGGCGCA GAAACTGGCC
GCCAAGGTCA AGAGCGGCAA CGGGTTCGAC CTGAATGACT TCCTGTCGCA AATCCGGCAG
ATGAAGCAGA TGGGTGGCCT GTCCAGCCTG CTGGACAAGC TCCCGGCGCA ACTGATGGCC
AAGGCCGGCG CGCTGGACAT GGACCGGGCC GACAAGGACC TGCGGCACAA GGAAGGCATC
ATCCAGAGCA TGACGCCGCT GGAGCGGCGC AAGCCCGAAC TCATCAAGGC CACCCGCAAA
AGGCGCATCG CCCATGGCGC CGGCGTGCAT GTGCAGGAGG TCAACCGCCT GCTCAAGGAA
TTCGAGCAGA TGCAGGGCAT GGTCAAGAAG ATGAAGGGCG GCGGGCTGAT GAAAATGATG
AAGACGATGG GCGGCATGAA CGGCCTGCCC AGGATGCCGT TCTGA
|
|---|
| Protein sequence | MASALADKLT RLVKELRGQA RITESNVQDM LREVRMALLE ADVALPVVRD FIARVKDKAL
GQEVLGSLKP GQTLVGIVNR ELAATMGQGV ADINLAAQPP AVILMAGLQG AGKTTTTAKL
AKYLIEKRKK KVLTVSGDVY RPAAIEQLQT VTRQAGGAFF PSLPEQKPLD IALAALDHAR
KHYFDVLLVD TAGRLAIDQA MMEEIKALHA ALNPVETLFV VDAMQGQDAI NTARAFREAL
PLTGIVLTKL DGDSRGGAAL SVRQITGVPI KFAGVSEKLD GLDVFDAERH AGRILGMGDI
VALVEQVTAG VDIEAAQKLA AKVKSGNGFD LNDFLSQIRQ MKQMGGLSSL LDKLPAQLMA
KAGALDMDRA DKDLRHKEGI IQSMTPLERR KPELIKATRK RRIAHGAGVH VQEVNRLLKE
FEQMQGMVKK MKGGGLMKMM KTMGGMNGLP RMPF
|
|---|
| |