Gene Veis_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1486 
Symbol 
ID4694264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1660518 
End bp1661993 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content68% 
IMG OID639849251 
ProductUDP-N-acetylmuramate 
Protein accessionYP_996264 
Protein GI121608457 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.486018 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTC ACATACTGGG CATCTGCGGC ACCTTCATGG GCGGTCTGGC AGCGCTCGCG 
CACGCGGCGG GCCACCGGGT GACGGGTTGC GACGCTGGCG TCTATCCCCC GATGAGCGAG
CAGCTCAGTG CACTGGGCAT TGATTTGATC GAGGGTTTTG GCGCCGACCA GTTGGCGCTC
AGGCCCGACA TGTTCGTGAT CGGCAACCTG GTCAGCCGCG CCCGGCAGCC CGACGGCAGC
CCGAAGTTCC CGCTGATGGA AGCCATCCTG GATGCCGGCC AGCCCTACAC CAGCGGCCCC
CAGTGGCTGG CCGAGCAACT GCTGCCGGGG CGCCATGTGC TGGCCGTCGC GGGCACCCAC
GGCAAGACCG GCACCAGTTC GATGCTGGCC TGGATACTGG AATGCGCGGG GCAGCAACCG
GGCTTTCTGA TCGGCGGCGT GCCGCTGAAC TTTGGCCTGT CTGCCCGGCT CGGCGCGCCG
CAACGCCCGC TCCCGGCCCC TGCCCCGCTG GGCGCGACGC CGCTGTTCGT GATCGAGGCG
GACGAATACG ACACCGCCTT CTTCGACAAG CGCAGCAAGT TCGTGCACTA CCGGCCCCGC
ACGGCGGTGC TCAACAACCT CGAATTCGAC CACGCCGACA TCTTTGCCGA CCTGGCCGCG
ATCGAACGCC AGTTCCACCA CTTGGTGCGC ACCATGCCGG CATCGGGCCG CGTGGTCGTC
AACGGACTGG ATGCAAGCCT GGCCCGCGTG CTGCAGATGG GCTGCTGGAG CCAGGTGACC
CGTTTCGGCG TGGACACGAT GAGCGCCTTC GGCGCGGAAG GGACAAGCGC CTTCGGCGCA
GAAACGATCA GCGCCTTCGG CGCCGAAGGC CCCCCCCAGT CCTTCGACGT AACGCACCAA
GGCCAAAAGC TGGCCCGCGT CGAATGGGCG CTGACCGGTG TGCACAACCA GCTCAACGCG
CTGGCCGCCA TCGCCGCCGC GCAGCATGTG GGCGTGGACC CCGGGCAGGC CGCAGCGGCC
CTGGCCACAT TCCGCAACGT CAAACGGCGC ATGGAACTGC GCGGCATCGT CGGCGGCGTT
GCCGTGTATG ACGACTTTGC CCACCACCCG AGCGCGCTGC GCACCACCCT GGACGGGCTG
CGCCGCAGCC TGGGCGCCGG AGCGCGCATC CTGGCCGTGT TCGAGCCGCG CAGCAACACC
ATGAAACTGG GCACGATGAA AAGCCGGCTG CCATGGGCGC TGGAACCGGC CGACCTGGCG
TTTTGCCTCA CCGCAGGACT GGATTGGGAC GCCGCACAGG CGCTGGCCCC GCTGGGCGTA
GGCCCCGGCC TGCGCGCGCA GACCGCCCCC GATAGCGCCA CGCTGCTGGC CCAGGTCACG
CAAGCGGCCC GCCCCGGCGA CCATGTGGTG TGCATGAGCA ATGGCGGCTT TGACGCAATG
CCCGCCAAGC TGCTGCAAGC ACTACAAAAA CAATAG
 
Protein sequence
MHIHILGICG TFMGGLAALA HAAGHRVTGC DAGVYPPMSE QLSALGIDLI EGFGADQLAL 
RPDMFVIGNL VSRARQPDGS PKFPLMEAIL DAGQPYTSGP QWLAEQLLPG RHVLAVAGTH
GKTGTSSMLA WILECAGQQP GFLIGGVPLN FGLSARLGAP QRPLPAPAPL GATPLFVIEA
DEYDTAFFDK RSKFVHYRPR TAVLNNLEFD HADIFADLAA IERQFHHLVR TMPASGRVVV
NGLDASLARV LQMGCWSQVT RFGVDTMSAF GAEGTSAFGA ETISAFGAEG PPQSFDVTHQ
GQKLARVEWA LTGVHNQLNA LAAIAAAQHV GVDPGQAAAA LATFRNVKRR MELRGIVGGV
AVYDDFAHHP SALRTTLDGL RRSLGAGARI LAVFEPRSNT MKLGTMKSRL PWALEPADLA
FCLTAGLDWD AAQALAPLGV GPGLRAQTAP DSATLLAQVT QAARPGDHVV CMSNGGFDAM
PAKLLQALQK Q