Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1486 |
Symbol | |
ID | 4694264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1660518 |
End bp | 1661993 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639849251 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_996264 |
Protein GI | 121608457 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.486018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACATTC ACATACTGGG CATCTGCGGC ACCTTCATGG GCGGTCTGGC AGCGCTCGCG CACGCGGCGG GCCACCGGGT GACGGGTTGC GACGCTGGCG TCTATCCCCC GATGAGCGAG CAGCTCAGTG CACTGGGCAT TGATTTGATC GAGGGTTTTG GCGCCGACCA GTTGGCGCTC AGGCCCGACA TGTTCGTGAT CGGCAACCTG GTCAGCCGCG CCCGGCAGCC CGACGGCAGC CCGAAGTTCC CGCTGATGGA AGCCATCCTG GATGCCGGCC AGCCCTACAC CAGCGGCCCC CAGTGGCTGG CCGAGCAACT GCTGCCGGGG CGCCATGTGC TGGCCGTCGC GGGCACCCAC GGCAAGACCG GCACCAGTTC GATGCTGGCC TGGATACTGG AATGCGCGGG GCAGCAACCG GGCTTTCTGA TCGGCGGCGT GCCGCTGAAC TTTGGCCTGT CTGCCCGGCT CGGCGCGCCG CAACGCCCGC TCCCGGCCCC TGCCCCGCTG GGCGCGACGC CGCTGTTCGT GATCGAGGCG GACGAATACG ACACCGCCTT CTTCGACAAG CGCAGCAAGT TCGTGCACTA CCGGCCCCGC ACGGCGGTGC TCAACAACCT CGAATTCGAC CACGCCGACA TCTTTGCCGA CCTGGCCGCG ATCGAACGCC AGTTCCACCA CTTGGTGCGC ACCATGCCGG CATCGGGCCG CGTGGTCGTC AACGGACTGG ATGCAAGCCT GGCCCGCGTG CTGCAGATGG GCTGCTGGAG CCAGGTGACC CGTTTCGGCG TGGACACGAT GAGCGCCTTC GGCGCGGAAG GGACAAGCGC CTTCGGCGCA GAAACGATCA GCGCCTTCGG CGCCGAAGGC CCCCCCCAGT CCTTCGACGT AACGCACCAA GGCCAAAAGC TGGCCCGCGT CGAATGGGCG CTGACCGGTG TGCACAACCA GCTCAACGCG CTGGCCGCCA TCGCCGCCGC GCAGCATGTG GGCGTGGACC CCGGGCAGGC CGCAGCGGCC CTGGCCACAT TCCGCAACGT CAAACGGCGC ATGGAACTGC GCGGCATCGT CGGCGGCGTT GCCGTGTATG ACGACTTTGC CCACCACCCG AGCGCGCTGC GCACCACCCT GGACGGGCTG CGCCGCAGCC TGGGCGCCGG AGCGCGCATC CTGGCCGTGT TCGAGCCGCG CAGCAACACC ATGAAACTGG GCACGATGAA AAGCCGGCTG CCATGGGCGC TGGAACCGGC CGACCTGGCG TTTTGCCTCA CCGCAGGACT GGATTGGGAC GCCGCACAGG CGCTGGCCCC GCTGGGCGTA GGCCCCGGCC TGCGCGCGCA GACCGCCCCC GATAGCGCCA CGCTGCTGGC CCAGGTCACG CAAGCGGCCC GCCCCGGCGA CCATGTGGTG TGCATGAGCA ATGGCGGCTT TGACGCAATG CCCGCCAAGC TGCTGCAAGC ACTACAAAAA CAATAG
|
Protein sequence | MHIHILGICG TFMGGLAALA HAAGHRVTGC DAGVYPPMSE QLSALGIDLI EGFGADQLAL RPDMFVIGNL VSRARQPDGS PKFPLMEAIL DAGQPYTSGP QWLAEQLLPG RHVLAVAGTH GKTGTSSMLA WILECAGQQP GFLIGGVPLN FGLSARLGAP QRPLPAPAPL GATPLFVIEA DEYDTAFFDK RSKFVHYRPR TAVLNNLEFD HADIFADLAA IERQFHHLVR TMPASGRVVV NGLDASLARV LQMGCWSQVT RFGVDTMSAF GAEGTSAFGA ETISAFGAEG PPQSFDVTHQ GQKLARVEWA LTGVHNQLNA LAAIAAAQHV GVDPGQAAAA LATFRNVKRR MELRGIVGGV AVYDDFAHHP SALRTTLDGL RRSLGAGARI LAVFEPRSNT MKLGTMKSRL PWALEPADLA FCLTAGLDWD AAQALAPLGV GPGLRAQTAP DSATLLAQVT QAARPGDHVV CMSNGGFDAM PAKLLQALQK Q
|
| |