Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1458 |
Symbol | |
ID | 4691282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1630077 |
End bp | 1631429 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639849223 |
Product | CRISPR-associated Csy1 family protein |
Protein accession | YP_996236 |
Protein GI | 121608429 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02564] CRISPR-associated protein, Csy1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000589655 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA CCGACACCCC ATCGCATGAC AGCTTCAAAG CGGCAGTGCA AGCGTTCCTT CAGGAGCGCT TGGAGGCAAA GCTCGACAAG CTCAAGGATG ACGACCCCAA GCGCGAGGAA GAGCGCAACA AATACCGGCC AACGGTCTGG ATTGAAGATG CTGCGCGGCG CGTGCAGCAA ATCCAGGCTG TCACCCATTC CCTCAAACCC ATCCATCCCG ACGCCAGAGG CACCAATCTG TATGTGGAGC CGGATAGCCT GCCCATGCTG ACCGAGTTGG GCAGCCACGC ACTGGGCAAA GACTTTGCAC CTGATGTAAC AGGCAATGCA GCAGCGTTGG ACGTGTACAA ATTCCTGAAA CTGCAAGTGG GCGAACGCAG CCTGCTCACC GCCTTGCAGG AAGAAGACCC GGCGGCCATG CAGGTGCTGC ATGACGACGC GGCGCAAGCC AAGGCATTGC GCGACAAGTT GGTCGGCTTG ACGCAGCCCG GTTCTGGCGG AGCCAGTTCG CACAGCCGGG CCAAGCAGTT GTATTGGCTG ACCGGCAGCG ATGCTGCTGC CGACGACGAC TACGAACTAC TGGCCCCCTT GTTTGCCACG TCGCTGGCCC ACCGCGTATA TGCCGATGTG CAAGAGGTCC GCTTTGGCGA AGCCAACAAG GCCGCTCGTC AGGCATGGCG CGAACGCAAG GCGCATGACG GCGTGTTGGT GGACTATCCC GGGCTAGCCA TGCAAAAGAT GGGCGGAACA AAGCCACAAA ACATCAGCCA ATTGAATAGT GAGCGCGGCG GGGTGAACTA TTTGCTGGCC TCGTTGCCGC CCATTTGGAA GGTGACCGAG CGGCGCCTGC CGGTCAATAC CGACTCGGTG TTCAAGCACC TGTACCCGCA GCGGCCCGAC GTACAAAAAA CAGTGCGTGA ATTGCGCCGC TTCCTGGAAG AAGACCCCGA GCCGAACCTG GCTACACGCG AACGCCGCGC AGCCTATGTC GAAACGCTGG TGAATGAACT GCTCAATCTG GCAGGCGAGT TGCAACAAGG CTTGCCTGCA GGCTGGACGC TGAACGACAA GCGTTTCCAG CAATTGGCGC CTGTGGAACA ACTGTGGCTG GACCCACGGC GCGCCACACT GCCCGATGAG GACGACTTTG CCAAAGAATG GTTATGGCAG GACTGGCCCG CCGCCATCGC CAAGCGCTTT GGCAACTGGC TCAACGACAA ACTGGCAGGC CGACTGCTGG TAGGCGATGT CGAGGCCCGC GAATGGCAGC GTGCGCTGAT CGGTGAGGAC GATGGCTGGC GCGAAGCGCT GACCGAACAA CGCAAACACA TTCATCAACA AAGGGGCCAG TGA
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Protein sequence | MAKTDTPSHD SFKAAVQAFL QERLEAKLDK LKDDDPKREE ERNKYRPTVW IEDAARRVQQ IQAVTHSLKP IHPDARGTNL YVEPDSLPML TELGSHALGK DFAPDVTGNA AALDVYKFLK LQVGERSLLT ALQEEDPAAM QVLHDDAAQA KALRDKLVGL TQPGSGGASS HSRAKQLYWL TGSDAAADDD YELLAPLFAT SLAHRVYADV QEVRFGEANK AARQAWRERK AHDGVLVDYP GLAMQKMGGT KPQNISQLNS ERGGVNYLLA SLPPIWKVTE RRLPVNTDSV FKHLYPQRPD VQKTVRELRR FLEEDPEPNL ATRERRAAYV ETLVNELLNL AGELQQGLPA GWTLNDKRFQ QLAPVEQLWL DPRRATLPDE DDFAKEWLWQ DWPAAIAKRF GNWLNDKLAG RLLVGDVEAR EWQRALIGED DGWREALTEQ RKHIHQQRGQ
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