Gene Veis_1453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1453 
Symbol 
ID4693364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1607775 
End bp1608599 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID639849219 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_996232 
Protein GI121608425 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.736021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCCCCGTGAG CACCATCCAC GCGCGCGACA ACGCCTTCGT CAAGGAACTG 
CGCCGGCTGG CCCAAGACAG CACCGCCTAC CGCAGACAGG GCCGGCTGTG GCTGGAAGGC
GAGCACCTGT GCCGCGCGGC ACTGGCGCGC CAACTGCGCC CATCGATCGC CGTATTTGCC
GAGTCTTTCT GGCCGCAGGC ACAGGCCGAA TATGCGCAGG ACGCAAGCAA GATAATGGTT
CTTGCCGAGC CACTGTTTGC CGGCATCAGC GCCCTGGAAT CGCCTGCGCG CATGGGCTTC
ATTCTGGACC TGCCCGCGCC CGCCAGCCTG CAACCGGGCG CCGCCACCGT GGTACTGGAC
CGGGTGCAGG ATGCCGGCAA CATGGGCTCG ATCCTGCGCA GTGCAGCAGC CTTCGGATTC
CGGCAGGTGC TGGCACTCAA AGGCAGCGCC GCACTCTGGT CGCCGAAAGT GCTGCGCGCC
GGGATGGGCG CACATTTCGC GCTGAATCTG ATCGAGGCCG CCGGGCCGGC AGAACTGCAG
GCGCTGCAAC TGCCCATGCT CGTGACCAGT CCACATGCCG GCGAATACCT GCACCGCGCC
ACATTGCCCT GGCCCTGCGC CTGGATCATG GGCCATGAAG GACAAGGCGT AACCCCCGCG
CTGACCGCCA AGGCCGCACT ACGCATCCGC ATCGCCCAGC CCGGAGGCCA GGAGTCGCTG
AACGTCGCAG CAGCAGCGGC CATCTGCCTG CACGCCAGCA GCGCGCTGGC CGCAGGTGCT
GGCGAGGGCA TGGAGGGGGT TTCTGAGTTG CCTGTTCGGC GGTGA
 
Protein sequence
MSAAPVSTIH ARDNAFVKEL RRLAQDSTAY RRQGRLWLEG EHLCRAALAR QLRPSIAVFA 
ESFWPQAQAE YAQDASKIMV LAEPLFAGIS ALESPARMGF ILDLPAPASL QPGAATVVLD
RVQDAGNMGS ILRSAAAFGF RQVLALKGSA ALWSPKVLRA GMGAHFALNL IEAAGPAELQ
ALQLPMLVTS PHAGEYLHRA TLPWPCAWIM GHEGQGVTPA LTAKAALRIR IAQPGGQESL
NVAAAAAICL HASSALAAGA GEGMEGVSEL PVRR