| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1452 |
|---|
| Symbol | rnhB |
|---|
| ID | 4691410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1607149 |
|---|
| End bp | 1607778 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639849218 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_996231 |
|---|
| Protein GI | 121608424 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.44522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCG GACAATCCTC GCGCACTGAA CCGGCCAGCC TGCCCTGGCA TCCATCGGGC
CTGGTCGCCG GCGTCGATGA GGCCGGCCGA GGCCCGCTGG CCGGGCCGGT CATGGCCGCC
GCCGTCATGC TGGACGAGCG GCAACCGATC ATGGGCCTGG CCGACTCGAA AAAACTCACG
CCGGCCAGGC GCGCATCGCT GTTTGACGAA ATCCGGGCCA AGGCGCTGTG CTACAGCATT
GCCCAGGCCA GCGTGCAAGA GATCGACGCG CTCAACATCC TGCAAGCCAC GCTGCTGGCG
ATGCGCCGCG CCGTGCAGGG CCTGCGGCTC AGGCCGGCGC TGGTGCTGGT CGATGGCAAC
CGCCTGCCCC GGCTCGACAT ACCGGCGCAA GCCATCGTCA AAGGCGACGC GCTGCAGCCC
GCCATCTCGG CGGCCTCGAT CCTTGCCAAG GTGCAGCGCG ACCACTGGTG CGTGCAGGTG
CACGCGGAGT TTCCGCAATA CGGCTTTGCC GGGCACAAAG GCTATGGCAC GGCCATGCAC
CTGGCGGCAC TGCGCGCGCA TGGCGCCTGC ATCCACCACC GGCGCTCGTT CGCCCCGGTA
GCCCGAAGCC TGCCCGGGGC TTGCCGATGA
|
|---|
| Protein sequence | MRSGQSSRTE PASLPWHPSG LVAGVDEAGR GPLAGPVMAA AVMLDERQPI MGLADSKKLT
PARRASLFDE IRAKALCYSI AQASVQEIDA LNILQATLLA MRRAVQGLRL RPALVLVDGN
RLPRLDIPAQ AIVKGDALQP AISAASILAK VQRDHWCVQV HAEFPQYGFA GHKGYGTAMH
LAALRAHGAC IHHRRSFAPV ARSLPGACR
|
|---|
| |