| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1451 |
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| Symbol | lpxB |
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| ID | 4690610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1606008 |
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| End bp | 1607177 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639849217 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_996230 |
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| Protein GI | 121608423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.337005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.482278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGG CAATGCAAGC CCCCCTGCGC ATCGCCATGG TGGCCGGTGA AGCATCGGGC
GACATGCTCG CCGCCCTGCT GATCGGCGGC CTGCAAGCCG ATTGGCCGGG CATCGAGCTT
TGCGGCATAG GAGGCCCCGA AATGGCGCGC CGCGGGTTCA CGCCCTGGTG GCCCAGCGAG
CGGCTGGCCG TGCATGGCTA CAGCATGCAA ATGCTGCGCC GGCTGCGCGA ACTGCTCGGC
ATCCGCCGGC AACTGCGCCG GCGCCTGCTC GCGCACCGCC CTGCGCTGTT CATCGGCATC
GACGCCCCCG ATTTCAACCT CGGCCTGGAA GCCGATTTGC GTGCCGCCGG CGTCAAGACA
GTGCATTTCG TGTGCCCGTC GATCTGGGCC TGGCGCGCCC ACCGGGTCGG CCAGATCCGT
CGCAGCGCCG ACCATGTGCT GTGCATCTTC CCGTTCGAGC CAGCGCTACT GGCGCAGCAT
GGCATTGCCG CCACCTATGT CGGCCATCCG CTGGCGGCGC TGATTGCGCT GCAGCCTGAC
CGCGCAGCAG CCCGCGCACA GCTCGGTCTG CGCGCGGACG ACGAGGTGCT GGCCATTTTG
CCGGGCAGCC GGGCCTCGGA AATCGAGTAC CTCGCCCGCC CCTTTTTCCA GGCCGCAGCG
CTGCTGCGAC AAACCCGGCC CGCGCTCAAA TTGCTGGTGC CCGCCGTGCT ACCCCTGCGC
GAGCGCATCG TGCAGGCGGC CCAGGCCGCA GGTATGGGCG AGCAGGTACA AATCATTGCC
GGGCAGTCGC ACACCGTGCT CGCGGCCTGC GATGCCACGC TGATCGCCAG CGGCACCGCC
ACACTCGAAG CCGCGCTGTT CAAACGCCCG ATGGTGATCG CTTACCGCAT GCACCCGTTG
AACTGGTCGC TGATGCGCCG CCAGCAATTG CAGCCCTGGG TGGGCCTGCC CAACATCCTG
TGCCGTGAAT TCGTGGTGCC CGAACTGCTG CAAGATGCCG CCACGCCGCA GGCACTGTGC
GCTGCCACGC AGCACTGGCT GGACGCGCGG CGCCAGCATC CGCCAACCAT CACCGCCCTG
GAACGACGCT TTACCGCGCT GCACCACAGC CTGCAGCGCA ACACCCCGCA ATTGGCCGCC
GATGCGCTCC GGACAATCCT CGCGCACTGA
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| Protein sequence | MDPAMQAPLR IAMVAGEASG DMLAALLIGG LQADWPGIEL CGIGGPEMAR RGFTPWWPSE
RLAVHGYSMQ MLRRLRELLG IRRQLRRRLL AHRPALFIGI DAPDFNLGLE ADLRAAGVKT
VHFVCPSIWA WRAHRVGQIR RSADHVLCIF PFEPALLAQH GIAATYVGHP LAALIALQPD
RAAARAQLGL RADDEVLAIL PGSRASEIEY LARPFFQAAA LLRQTRPALK LLVPAVLPLR
ERIVQAAQAA GMGEQVQIIA GQSHTVLAAC DATLIASGTA TLEAALFKRP MVIAYRMHPL
NWSLMRRQQL QPWVGLPNIL CREFVVPELL QDAATPQALC AATQHWLDAR RQHPPTITAL
ERRFTALHHS LQRNTPQLAA DALRTILAH
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