Gene Veis_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1445 
Symbol 
ID4691438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1599417 
End bp1600796 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content69% 
IMG OID639849211 
Productputative membrane-associated zinc metalloprotease 
Protein accessionYP_996224 
Protein GI121608417 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0750] Predicted membrane-associated Zn-dependent proteases 1 
TIGRFAM ID[TIGR00054] RIP metalloprotease RseP 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.16502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA CCATCGTTGC CTTTGCTGCG GCCATCGGCC TGTTGATCGC CGTGCACGAA 
TACGGGCATT ACCGGATGGC CGTGGCCTGC GGTGTCAAGG TGCTGCGCTT CGCGGTGGGT
TTTGGCCCTC CCTTGCTGCG CTGGCAGCCC CGAGGCTCGC CGACCGAGTT CGTGCTCGGC
GCCTTTCCGC TGGGGGGCTA TGTGCGCATG CTCGACGAGC GCGAAGCGCC GGTGCCGCCC
GGGGAGCGCC ATCTGGCCTT CGGCCGCCAG CCGCTGCGCT CGCGGGTGGC GATCACGCTG
GCCGGGCCGG TGGCCAACCT GCTGCTGGCG GCGCTGCTGT ATTCCATCGT CAACTGGAAC
GGGGTGGAGC AGCCCCGCGC CCTGCTGGCC AGTCCGGTGG CCGGCTCGGT GGCGCAGGCG
GCGGGCCTGC GCGGTGGGGA GTTGGTCGAG CGCGGCGCGT TGGGCGCGCA AGAATGGATT
GCGGTGCGCT CGTTCGAGGA CCTGCGTTGG CTGCTGATGC GCGGCGCGCT CGAAGGGGAG
AACGTGCGCC TGGATGTGCA GTCTGCGCAG GGCAACGGGC ACCGGGAACT GCTGCTGGAC
ATGTCCGGGA TCGACAGCCG GCAGGTCAAT GCCCGGATGT TTCGCGAGAT CGGGATTCTC
GGCCCCTGGA CGCGCCCGGT GCTGGGGCAA ATCCTGCCGC AGGGCGCGGC CGAGCGCGCG
GGCCTGCGCC GGGGCGATGT GGTGCTCAAG GTCGGCAGCA CCGAGGTGGT CGACGGTCAG
CAGTTGCGCG AACTGATCCG GCACTCCGTT CGGGGCGCCG GGCCATGGAG CCAGACCTGG
CGCATCGAGC GCGCCGGGCA AGTGCTGACG CTGCCGGTGC AACCCGATGT GGTGCGGGAG
TCGGGGGGGT CGGCCGAGTC CTCGATCGGG CGCATCGGCG CCGAGGTGGG CGCCCTGTCC
GAGTTCGTCA CGGTCCAGTA CGGCTTGCTC GAAGGCGCCT GGGCCGGCCT CGTCAAGACC
TGGGATGTCT CTGCGCTCAC GCTGCGCATG ATGGGGCGCA TGGTGATCGG CGAGGCTTCG
CTGAAGAACC TGAGCGGGCC GCTGACGATT GCCGACTACG CGGGCCGCTC GGCCGACATG
GGGCTGACGC CGTACCTGAT CTTCCTGGCG CTGATCAGCG TCAGCCTGGG GGTGCTGAAC
CTGCTGCCGC TGCCGGTCCT CGATGGTGGG CACCTGATGT ATTATCTTTG GGAGGCGGTC
ACGGGCAAGG GGGTGTCGGA TGCATGGATG GAGCGCCTGC ACCGTGGCGG CGCGGTCTTT
TTGCTGCTGC TGATGTCCGT CGCCCTGTTC AACGATGTCA CCCGGATCTT CTTTGGTTGA
 
Protein sequence
MLLTIVAFAA AIGLLIAVHE YGHYRMAVAC GVKVLRFAVG FGPPLLRWQP RGSPTEFVLG 
AFPLGGYVRM LDEREAPVPP GERHLAFGRQ PLRSRVAITL AGPVANLLLA ALLYSIVNWN
GVEQPRALLA SPVAGSVAQA AGLRGGELVE RGALGAQEWI AVRSFEDLRW LLMRGALEGE
NVRLDVQSAQ GNGHRELLLD MSGIDSRQVN ARMFREIGIL GPWTRPVLGQ ILPQGAAERA
GLRRGDVVLK VGSTEVVDGQ QLRELIRHSV RGAGPWSQTW RIERAGQVLT LPVQPDVVRE
SGGSAESSIG RIGAEVGALS EFVTVQYGLL EGAWAGLVKT WDVSALTLRM MGRMVIGEAS
LKNLSGPLTI ADYAGRSADM GLTPYLIFLA LISVSLGVLN LLPLPVLDGG HLMYYLWEAV
TGKGVSDAWM ERLHRGGAVF LLLLMSVALF NDVTRIFFG