| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1425 |
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| Symbol | |
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| ID | 4693783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1580153 |
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| End bp | 1582411 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639849191 |
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| Product | ribonuclease R |
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| Protein accession | YP_996204 |
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| Protein GI | 121608397 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCG GCGCGCAGTC CGCGCATGTG TCGGACGAGA TCGAAGGCAG CGTGCAGGGG
CACCGGGACG GGCACGGGGT CGTCATCCGT GACGACGGCC AAGGCGACCT GTATATCTCG
CCGAACGAGA TGCGCGCAGT GCTGCACAAG GACCGCGTGC GCGCGCGCAT CGTGCGCCAG
GATCGGCGCG GCCGCCCGGA GGGCCGTGTG GTCGAGATCA TCGAACGGCC GGCCCAGCCC
ATCATCGGCC GCTTGCTGCA AGAAAGCGGT GTGTGGCTGG TAGCGCCCGA GGACAAGCGC
TATGGCCAGG ATATCTTGAT CCCCAAGGGC GCCACCGGCG TTGCCAAGCC GGGGCAGGTG
GTGGTCGTCG AACTGACCGA GCCGCCGGCA TTGTTCGGCC AGCCCGTGGG CCGCATCACC
GAAGTGCTCG GCGAGGTCGA CGACCCGGGC ATGGAGATCG AGATCGCGGT GCGCAAGTAC
GGCGTGCCGC ATGAGTTTTC TGTTGCCGGC CTGGCGCAGG CCAAGGGCTT GCCCGACAAG
GTGCGCGCGC AGGACAAGAA GCACCGCGTC AACCTGTGCG ATATCCCGCT GGTCACCATC
GACGGTGAAG ATGCGCGCGA CTTTGACGAT GCCGTGTATT GCGAGCCGGC CAAGGTCGGC
CGCGCCAAGG GCTGGCGTTT GCTGGTGGCG ATTGCCGATG TCAGCCACTA TGTGGAGACC
GGCAGCGCGA TCGACATTGA CGCTTACGAC CGCGCCACCA GTGTCTACTT CCCGCGCCGC
GTGATTCCGA TGCTGCCCGA GAAGCTCAGC AACGGCCTGT GCTCGCTGAA CCCGCAGGTC
GAGCGCCTGT GCATGGTTTG CGACATGCTG GTCACGGCCC GGGGTGAGGT GCCGGCCTAC
CAGTTCTACC CGGCCGTGAT GTACAGCCAT GCGCGCTTGA CGTACACCGA GGTCGCCGCC
ATTTTGGCCA ACACGCGCGG GCCTGAAGCC GCCAAGCGCC AGGAGCGGGT CAAGGATTTG
CTAAACCTGC ACGATGTCTA CCACGCGCTG CTGCTGGCCC GGCGCGAGCG CGGGGCGGTG
GATTTCGAGA CCACCGAGAC GCAGATCGTC TGCGACGAGA ACGGGCGCAT CGAAAAGATC
GTGCCGCGCA TCCGCAACGA TGCGCACAGG CTGATCGAAG AGGCGATGCT GGCGGCCAAT
GTCTGCAGCG CCGACTTCAT CGTCCAGGGC GGCCAGCCGG GGCTATTTCG CGTGCACGAA
GGCCCCACGC CGGAAAAGCA GGTGCTCCTG CGCAACTACC TCAAGGCCAT GGCGGTGGGC
CTGTCGATCA GCGATGAGCC CAAGCCTGCG GAGTTCCAGG CGATTGCCGA GGCCACCAAG
GATCGGCCAG ACGCCCCGCA GATCCACATG ATGCTGCTGC GCTCGATGCA GCAGGCGATC
TACACGCCCG TCAACAGCGG CCACTTTGGC CTGGCGTTCG ATGCCTACAC GCATTTCACC
AGCCCGATCC GGCGCTATCC GGACCTGCTG GTGCACCGGG TCATCAAGGC CATTTTGGGC
AAGACGCAGT ACCAGTTGCC GGCGCTGCCG GCACCGGGCG AGGCGCAGGC CAAACTGGCC
AAGCGGCTGG CCGCGCCGGG CAGCAAGCCG CGCCAGCAGG CGCTCGGCCG CGCTGGCCTG
GCCTGGCAAG CTGCGGGCCT GCATTGCAGC GCCAACGAAC GCCGGGCCGA CGAGGCCAGC
CGCGATGTCG AGGCTTGGCT CAAGTGCAAG TACATGCGCG AGCATCTGGG CGAGGAATAC
AGCGGCGTGG TCAGCGCGGT CACCAGCTTC GGTATCTTCG TGACGCTCGA CGCGATGTAT
GTGGAGGGCC TGGTGCACAT CACCGAACTG GGGGGCGAGT ACTTCAAGTT CGACGAGGCG
CGCCAGGAAC TGCGCGGCGA GCGCACCGGC ATCCGCTATG CGATTGGTGC GCGGGTGCGG
GTGCAGGTCA GCCGCGTGGA TCTGGACGGC CGCAGGATCG ACTTTCGCCT GGTGCGCGAG
GGCGAGGAAT TGCCAGGAGG GGATGGCGCC AGTGGCGCTG CGCGCAAGAC CGGCGGGCGC
TCGGGAGGGC GCAAGTCGGC CCCGGGGGCT GCGCCATCGG TCAGCGGGAC GGTGGCAGAA
ACGCCCCCGA AGGCGCCGGT CAAGAAGAAG GAAAAGGCGG TCAGGAAAAA AGCGGTCGCC
GGCCAGACCG GCAAAGCGCG CAAGCCGCGC CGCAACTGA
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| Protein sequence | MTSGAQSAHV SDEIEGSVQG HRDGHGVVIR DDGQGDLYIS PNEMRAVLHK DRVRARIVRQ
DRRGRPEGRV VEIIERPAQP IIGRLLQESG VWLVAPEDKR YGQDILIPKG ATGVAKPGQV
VVVELTEPPA LFGQPVGRIT EVLGEVDDPG MEIEIAVRKY GVPHEFSVAG LAQAKGLPDK
VRAQDKKHRV NLCDIPLVTI DGEDARDFDD AVYCEPAKVG RAKGWRLLVA IADVSHYVET
GSAIDIDAYD RATSVYFPRR VIPMLPEKLS NGLCSLNPQV ERLCMVCDML VTARGEVPAY
QFYPAVMYSH ARLTYTEVAA ILANTRGPEA AKRQERVKDL LNLHDVYHAL LLARRERGAV
DFETTETQIV CDENGRIEKI VPRIRNDAHR LIEEAMLAAN VCSADFIVQG GQPGLFRVHE
GPTPEKQVLL RNYLKAMAVG LSISDEPKPA EFQAIAEATK DRPDAPQIHM MLLRSMQQAI
YTPVNSGHFG LAFDAYTHFT SPIRRYPDLL VHRVIKAILG KTQYQLPALP APGEAQAKLA
KRLAAPGSKP RQQALGRAGL AWQAAGLHCS ANERRADEAS RDVEAWLKCK YMREHLGEEY
SGVVSAVTSF GIFVTLDAMY VEGLVHITEL GGEYFKFDEA RQELRGERTG IRYAIGARVR
VQVSRVDLDG RRIDFRLVRE GEELPGGDGA SGAARKTGGR SGGRKSAPGA APSVSGTVAE
TPPKAPVKKK EKAVRKKAVA GQTGKARKPR RN
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