Gene Veis_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1387 
Symbol 
ID4691923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1547126 
End bp1548349 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content71% 
IMG OID639849155 
Productcytochrome oxidase assembly 
Protein accessionYP_996169 
Protein GI121608362 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.467334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCG ACACACAGCC TCTGTACGAT CTGGCGCCGC TGGTGCCGCT CATGCTGCTG 
GGTCTGGTGA TCGCGCTCGG GCCGCTGGCC TGGGTCTGGG CGCGCCATCG CCGCCGCTCG
CCGCTGCGAC GCCTGCAGGC GCTGACCCTG CTGACGCTGT TTTTGACCTT TGACCTGGTG
CTGTTTGGCG CTTTCACACG CCTGACCGAT TCGGGGCTGG GATGCCCCGA CTGGCCAGGC
TGCTACGGCA GCGCCAGCCC GGTGGGTGCC CATGCAGAGA TCGCGACCGC GCAGGCGGCG
CTGCCCACCG GCCCGGTCAC CCATGGCAAG GCCTGGGTCG AGATGCTGCA CCGCTATCTG
GCCCTGGGGG TGGGCGTGCT GATCAGCGTG CTGACGCTGT CGGCCTGGGT GCAGCATGGC
CGGGCCCGCC ATGGCGCGGC GCAGCCCCCA CCGATCAGCC CTTGGTGGCC CACGGCGACG
CTGCTCTGGG TCTGTCTGCA AGGGGCTTTT GGCGCCCTGA CGGTGACGAT GAAGCTGTTT
CCCGCCATCG TCACACTGCA CTTGGCCGGC GGCCTGGTGC TGCTGGCCCT GCTGTGCGTG
CAGGCAGTGC GCCATGCGCA GGCGCATGGG CCGCTGCGGC CGCAGGACCC GCCAGCGCAA
GGGGCGCAGG GCCGGTTGCC GGTCGAGCTC GCGCCCGCAC TGCGCCGGGG CCTGGCCGCC
ACCGGCCTGC TGCTGGCCAT GCAACTGCTC GCCGGCGGCT GGGTCAGCAC CAATTACGCG
GTGCTGGCCT GCACCACGTT CCCGACCTGC CAGGGCAGTT GGTGGCCGGC GATGGATTTT
GCCCAGGGCT TTGCAATCTG GCGCCCGCTG GGCCTGCGGC AAGACGGCAG CCACATCGAC
TTTGCCGGTT TGACCGCCAT TCACTACACA CACCGCCTGC TGGCCTATGC GACGCTGCCG
GCGCTGGGCC TGCTGGCCTG GCGCCTGCAC CACCATCGGC GGCTGCCGGC GCAGGCGCGC
TGGCTGGCCA TCCTGGGGTT GCTGCAATTG GCCACGGGCC TGTCCAGCGT GGTGCTGGGC
TGGCCCTTGC TGGCGGCCGT GATGCACACC GGCGGCGCTG CCGCCCTGGT GCTGGTGTGG
ACCTGGGCCT GGGTGGCAAG CCGCGCGCAG CCATCACCAC CCGCGTTGTG CCCGCCCGCC
AACGCACCGA GAATGTCCGC ATGA
 
Protein sequence
MNTDTQPLYD LAPLVPLMLL GLVIALGPLA WVWARHRRRS PLRRLQALTL LTLFLTFDLV 
LFGAFTRLTD SGLGCPDWPG CYGSASPVGA HAEIATAQAA LPTGPVTHGK AWVEMLHRYL
ALGVGVLISV LTLSAWVQHG RARHGAAQPP PISPWWPTAT LLWVCLQGAF GALTVTMKLF
PAIVTLHLAG GLVLLALLCV QAVRHAQAHG PLRPQDPPAQ GAQGRLPVEL APALRRGLAA
TGLLLAMQLL AGGWVSTNYA VLACTTFPTC QGSWWPAMDF AQGFAIWRPL GLRQDGSHID
FAGLTAIHYT HRLLAYATLP ALGLLAWRLH HHRRLPAQAR WLAILGLLQL ATGLSSVVLG
WPLLAAVMHT GGAAALVLVW TWAWVASRAQ PSPPALCPPA NAPRMSA