| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1366 |
|---|
| Symbol | |
|---|
| ID | 4690586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1527977 |
|---|
| End bp | 1529422 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639849135 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_996149 |
|---|
| Protein GI | 121608342 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.986261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCGCT GCCGTATGTT CGCCGCTCTC GACACCGTGA CTGCCACGTC GCACCTACGC
GAAGTTCAAA CGCTGCGCGT CGCAAAGATG GAGAGCAAGC CCGATGGACC ATCCTTGCGC
GTCAAGCTGC GCGGACTGCG TGCCATTGTC GCAGTCGTCG ACCAAGGCGC TGTGGGTAAA
GCGGCTGAAG TGCTGCACCT TTCGCAGCCC GCCGTGACGC GCGCGTTGCA GGATATAGAG
GCCGGCCTCG GATTCCCGTT GTTCGACCGT ACCGCGCGAG GCATGTTGCC GACTGCAGCG
GGTCGCATTC TCGGCACACG CGCGCGGCGG GCCTTCGAAG AACTGGCGAA AGGCTGCAGC
CGAGCCATCG CTTTGGTGGG ATCGGCCCAA TGCGAAATTA GCCGTGCTGC GCGCTTTTCT
GCCGCGGTGG GGCCACAGGC GCTCGCGAGC TTGATCGCAG TGGCAGACAT GGGAAGCGGC
CCGCGTGCCG GTGAATGCTT GGGGTGTTCC CAGCCAACGA TCCATCGAAA TTTGCTGAAA
CTGGAGTATC TCGTTGGCGT GTCGCTGTTT CAGCGCACGC CCAGGGGCAC GCGGCTCACC
GAGTCGGGGG AGGCCCTGCT TCGCGGTGTG AAGCTTGCCT TTGCCGAGAT CGCAATCGCC
GAGGATGAAT TGGCTGCGTT TGGAGGACGC CTTCAAGGTA GGGTGGTTGT CGCAGCGCTG
CCTCTGTCCA GCGCCTTTCT GTTGCCGCGT GCGATTGACC GCCTGCTCAG CAAGCATCCG
CGCCTCAATG TCACCGTTGT GGATGGCACT TACGACGCCC TCGTCCAAAT GTTGCGCTGT
GCGGATGTCG ACATGATCGT AGGTGCATTG AGGTTGAACT CGCCGCCCTC CGAAATCGCT
CAAGAAATGC TCTTTGACGA CGGGCTCACG GTCATCGCCC GCGCCCAACA TCCATGCCTT
TTGACGCAGA CCGCACGCGG ATTGCGCGAG CTGGTCCGAT ATCCGTGGAT CGTCCCACTG
CCCAACACCC CAGCGCGTGC GGCATTTGAG CACGCGTTTC GGATCGAAGG CGTCGCATGT
CCAGAAGCAC AACTCCAGGT AAACAGCCCA TCGGTCGTGC GCAACCTACT CCTGGAAAGT
GATCGGTTGG CATTGCTCTC GCCGCTGCAA GTGGACGCTG AGTTGCGCAC GGGCCAACTG
GTTCAAGTAC CTCTCGCGTT GCGAGATGCG TCAAGAGCAA TCGGTGTGGC CACGCGGCGC
AACGGATCGC TGTCGCCTGG CTCAGCGGGA CTGCTCGACG AGTTGCGCGT GCTCGCGGCC
ACATTGCAGC CGAGCCACAT TGCAGCCGAC CGCGCCCACC CCGGTGTGAG CATATCGCCG
TGCCGCATGG CTCCTGCATT GCCAAATGTG TACTCACTTG ACTTGGGCTA TCCGCAAAAC
GCATGA
|
|---|
| Protein sequence | MVRCRMFAAL DTVTATSHLR EVQTLRVAKM ESKPDGPSLR VKLRGLRAIV AVVDQGAVGK
AAEVLHLSQP AVTRALQDIE AGLGFPLFDR TARGMLPTAA GRILGTRARR AFEELAKGCS
RAIALVGSAQ CEISRAARFS AAVGPQALAS LIAVADMGSG PRAGECLGCS QPTIHRNLLK
LEYLVGVSLF QRTPRGTRLT ESGEALLRGV KLAFAEIAIA EDELAAFGGR LQGRVVVAAL
PLSSAFLLPR AIDRLLSKHP RLNVTVVDGT YDALVQMLRC ADVDMIVGAL RLNSPPSEIA
QEMLFDDGLT VIARAQHPCL LTQTARGLRE LVRYPWIVPL PNTPARAAFE HAFRIEGVAC
PEAQLQVNSP SVVRNLLLES DRLALLSPLQ VDAELRTGQL VQVPLALRDA SRAIGVATRR
NGSLSPGSAG LLDELRVLAA TLQPSHIAAD RAHPGVSISP CRMAPALPNV YSLDLGYPQN
A
|
|---|
| |