Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1365 |
Symbol | |
ID | 4690531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1526660 |
End bp | 1527838 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639849134 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_996148 |
Protein GI | 121608341 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.780713 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.67049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGTA GAAGATTGAT TATGGCCAGC GCGTGCTGTG CACTGGGCAT GGCGTTTAGC GCTCAAGCGG CCGAGATCAA AGTGGGGCTG CTCAGCCAGT TCTCAGGTCC CTATGCATGG TGGGGAAAAG AATACCAGCG CGGCGTGGAC CTGTATCTCG CACAGATCGG CAACAAGATA GGCACCCATA CGGTAACTGT CCTTGCCCGC GACGAAGGCG GCACCAGTCC GCAAAAATCA CGCCAGTTGG CGCAGGAACT GGTGGTGCGC GACCAGGTTC AGTATCTTCT TGGTGGGACT TTTACACCGA CCGTCCTCGG CGTCACAGAT GTAGCGACGC AAACCAAGAC CCCATTCGTG ATCTGCAACG CCGGGACGTC GAGCGTCACG CAAAAATCTC CGTACTTCAT TCGCGTGGGT TTCACCACCT GGACTGTGAG CGTTCCTCTC GTCCAGTACG CCTTGAGCCA GAATCTAAAG AAGGCGGCAA TTGTCGCTGC TGACTATGCT CCCGGTCAGG ATGCGATCGA CGCGTTCGGA CAAACTCTGT CCAAGCTGGG AGGAACGCTT TCTGGCGAGG TCAAAGTCCC TCTGGGAACG ACCAACTTCT CAAGCTACCT TCAGCGCGTG CGTGATCTTC AGCCGCAAAC GGTCTTCATG TTCATGCCAG TCGGACCAAT GTCGGCAGGA TTCATCAAGG CGTTCAAGGA ACGGGAACTC GACAAGGCAG GCATCACGCT GCTGGCCAAT GCCGAGACGA ACGAAGCAGA TCTCGGAGCC ATCGGCGATA GCGCTCTGGG TCTCACGACT GCACTGCACT ATTCACCGCA TCTCGAAAAT GCCACCAACA AGGCGTTTGT TGCAGCATAC AAAACGAAGT ACGGGAAGTC AGAACTTCCG AGCATCGCGT CACTCGCTGC GTATGACGGG ATGCGCCTGA TCGCGGAGAT GATCCGTGCC AACGACGGCG TTCGCGACGG CGACAAGGCC ATCACGGCCG CCAAGGGCTT CAAGTGGGAG AGTCCTCGCG GCCCGGTGAG CATCGATCCG AAGACACGCG AGATTGTGCA GAACGTCTAC ATCCGCAAGG TTGAGAAGAT CGACGGCCAG CTTGGCAACA AATCTTTTCA GACCTTTACG GGAGTGAAGG ATCCTTGGCA CGAGGCCAAC CCGCAGTGA
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Protein sequence | MLRRRLIMAS ACCALGMAFS AQAAEIKVGL LSQFSGPYAW WGKEYQRGVD LYLAQIGNKI GTHTVTVLAR DEGGTSPQKS RQLAQELVVR DQVQYLLGGT FTPTVLGVTD VATQTKTPFV ICNAGTSSVT QKSPYFIRVG FTTWTVSVPL VQYALSQNLK KAAIVAADYA PGQDAIDAFG QTLSKLGGTL SGEVKVPLGT TNFSSYLQRV RDLQPQTVFM FMPVGPMSAG FIKAFKEREL DKAGITLLAN AETNEADLGA IGDSALGLTT ALHYSPHLEN ATNKAFVAAY KTKYGKSELP SIASLAAYDG MRLIAEMIRA NDGVRDGDKA ITAAKGFKWE SPRGPVSIDP KTREIVQNVY IRKVEKIDGQ LGNKSFQTFT GVKDPWHEAN PQ
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