| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1354 |
|---|
| Symbol | |
|---|
| ID | 4691708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1504866 |
|---|
| End bp | 1506332 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849125 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_996139 |
|---|
| Protein GI | 121608332 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.295924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAA CTCCCCACGC CCAGAACCAA TTCGACGCCA AGGCCCAGGC CTGGTCCGCG
CTGTTCGACG AACCCATGAG CGATCTGGTC AAGCGCTACA CCGCCAGTGT GTCCTTCGAC
CAGCGCCTGT GGCAGGCCGA TATCGCAGGC AGCCTGGCGC ATGCCGAAAT GCTCGCCGCC
CAGGGGCTGA TCTCTGAAGA AGACCTTGCC AGCATCGAGC GCGGCATGGC ACAGATCAGC
GCCGAGATCG GCTCCGGCCG GTTTGTCTGG AAGCTCGATC TGGAAGACCT GCACCTGAAT
ATCGAGGCGC GCCTGATCGC GCTGGTGGGC GACGCCGGCA AGCGTTTGCA CACCGGCCGC
AGCCGCAACG ACCAGGTGGC CACCGACATG CGGCTGTGGC TGCGCGGCGA GATCGATCTG
ATCGACGGGC TGCTCCGGGC GCTGCAACTG GCGCTGGTCG AGGTGGCCGA GCAACATGTC
GCGCTGATCC TGCCCGGCTT CACCCACTTG CAGGTGGCCC AGCCGGTGAG CTTTGGCCAC
CATCTGCTGG CCTACGTGGA GATGTTTGCC CGCGATGCCG AGCGCATGGC CGAGGTGCGC
CGGCGCGTGA ACATGCTGCC GTTGGGCTGC GCGGCGCTGG CCGGCACCAG CTATCCGCTG
GACCGCGAAC GGGTGGCGCG CACGCTGGGC ATGGTGGATG CGGACGGCGC GCCGAGGCTG
TGCCAGAACA GTCTGGACGC GGTCAGCGAC CGCGACTTCG CCATCGAGTT CAGCGCCGCC
GCCAGCCTGT GCATGGTGCA TGTGAGCCGC CTGTCGGAGG AGTTGATCCT CTGGATGAGC
CAGAACTACG GGTTCATCCG TATCGCCGAC CGTTTCACCA CCGGCTCGTC GATCATGCCG
CAGAAAAAGA ACCCCGATGT GCCCGAACTG GCGCGTGGCA AGACCGGGCG CGTGGTGGGC
CACCTGATGG GCCTGATCAC GCTGATGAAG GGCCAGCCGC TGGCCTACAA CAAGGACAAC
CAGGAAGACA AAGAGCCGCT GTTCGATACC GTCGACACGT TGAAAGACAC GCTGCGCATC
TTTGCCGACA TGCTGGCCGG TCAGATCGAT CCCGCCACCG GCAACAAGGA AGGCGGCATC
AGCGTCAATG CCCCGGCGAT GGAGCAGGCC GCGCTCAAGG GCTATGCCAC GGCCACCGAC
CTGGCCGACT ACCTGGTCAG AAAGGGCCTG CCGTTTCGCG ATGCGCATGA AACCGTGGCC
CAGGCCGTCA AGGCCGCCAG CACCCATGCC TGCGACCTGT CGGAGTTGCC GCTGGCCGTG
CTGCAGGGCT TTCATCCGCA GATCGAAAAA GATGTGTACC AGGTGCTGAG CCTGCGTGGC
TCGCTGGACG CACGCAACAC CTTGGGGGGC ACAGCGCCGG CGCAGGTGCG CGCCCAGTTG
GCCCGGCACC GGGCGCGCCT GGCCTGA
|
|---|
| Protein sequence | MSKTPHAQNQ FDAKAQAWSA LFDEPMSDLV KRYTASVSFD QRLWQADIAG SLAHAEMLAA
QGLISEEDLA SIERGMAQIS AEIGSGRFVW KLDLEDLHLN IEARLIALVG DAGKRLHTGR
SRNDQVATDM RLWLRGEIDL IDGLLRALQL ALVEVAEQHV ALILPGFTHL QVAQPVSFGH
HLLAYVEMFA RDAERMAEVR RRVNMLPLGC AALAGTSYPL DRERVARTLG MVDADGAPRL
CQNSLDAVSD RDFAIEFSAA ASLCMVHVSR LSEELILWMS QNYGFIRIAD RFTTGSSIMP
QKKNPDVPEL ARGKTGRVVG HLMGLITLMK GQPLAYNKDN QEDKEPLFDT VDTLKDTLRI
FADMLAGQID PATGNKEGGI SVNAPAMEQA ALKGYATATD LADYLVRKGL PFRDAHETVA
QAVKAASTHA CDLSELPLAV LQGFHPQIEK DVYQVLSLRG SLDARNTLGG TAPAQVRAQL
ARHRARLA
|
|---|
| |