Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1344 |
Symbol | |
ID | 4692674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1493403 |
End bp | 1495913 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639849115 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_996129 |
Protein GI | 121608322 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.492796 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0418259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCG CCGCCATCTT GTGGGTGGAC TGCGACACGC AGCATGCGGC CGCAGCGCAG CAATTGATCA GCGCGCAGCA CCCGGGCTGG CGCCTGCTGC ACAGCCCCGC GCCCGGGCAG GCCAGCCGGG CCTGGGACGC GATGGTGCTG TGCCTGGACC CGGCAGCCCG GGAACTGCCC GATCTGCGCG AACCATGCGC CACCCACCCG GTGCTGCTGT GCCTGGACGC CGCGCAAGAA GCCCTGGCCG CGCGCGCCTT CCGCGACGGG CTGGGCGACT ATCTGCTGCG GGCTGCGGAT GGCCAGGCCC ATCTGGCTGA ACTGATGCAG CGCCTGGCCG CGCTGCTGCG ACAGCGCCTG GCCGCGCAGG CGCCCGGCGC CCCGAACCCG TCGGCGCGCA TGTTGGCGCT GCTGCAAGAG CAGCGCGCGG CCTTGCAAGC CACGCTGGCC AGCATCAGCC AAGGCATCTT CAAGACCGGG CCGGACGGCC GCATCAGCGT CTACAACCAG CGCGCGCTGG ACCTGCTGGA CCTGCCCGAA TCGCTGCTGG CCAACCGCCC CACGCTGGCC GAACTGACCC GCCTGCAGGC CGAGCGCGGC GACTTTGGCC CCGACTACGG CCTGGTGGGC CCGCTCGGGC AGGACTACCT GGCCCAGGGC GGCCGGGACT CGGCCCCGGC CATCTACTGG CGCACCACGC GCGATGGCCG CACGCTGGAG GTGCGCACCA ATGCGCTGGC CGACGGCAGC CAGGTGCGCA CCTTTGCCGA TGTCAGCGAC TACCTGCGCG TGGAAAACCA ACTGCGCGAC AGCGAGGCGC GCTTTCGCTC GCTGAGCGAC CTGTCGTCCG ACTGGTACTG GGAGCACGAC GCGCAGGGCC GCTTCACCCA ACTGGCCGGC GACCTGAGCG TCAACGGCAT GCCGCTATCG GCCGTGCTCG GGCGCACGCG CTGGGAGATC GGCGCACTGA ACATGACCGA GGCCGACTGG GCCGCGCACC GCGCCGTGCT GGCCGCGCAG CAACCGTTTC GCGACCTGGA GCTGCAACGC CGGCGCGCCG ATGGCAGCAT GCACTGGATC AGCGTCAGCG GCGTGCCGGT GCAGGGCGCC GACGGCACAC CGCGCGGCTA CCGGGGCGTG GGCCGCGACA TCACCGGACG CAAACAGGCC GAGGGCCAGA TCGAACGCCT GGCGTTCTAC GACGCGCTGA CCGGCCTGCC CAACCGGCGC CTGCTGCTCG ACCGCCTGCA GCACGCCACG GTGGCGGTCA CGCGCTCGAA CACCCAGGGC GCGCTGCTGT TCATCGACCT GGACAACTTC AAAAGCCTCA ACGACACCCT GGGCCACGAC GCCGGCGACC ACCTGCTGCA GCAGGCGGCG CAGCGCCTGA AAGCCTGTGT GCGCGAGGTC GACACGGTGG CCCGCTTCGG CGGCGACGAA TTCGTGGTGC TGCTCGCCGG GCTGAGCGCC GCTGCGGCCC AGGCCAGCGC CGAAGCCGCG CAGGTGGCCA AGCACATCGC CGCCAGCCTG GGCCAGCCCT ATGCGCTGGG CGGGGCCGTC CACCACAGCA CGCCGAGCAT CGGCATCGCG CTGTTCGGCC CGCAGGCTTG CCGCGTGGAC GAACTGCTCA AACAGGCCGA CCTGGCGATG TACCAGGCCA AGGCCGCAGG GCGCAACACC CAGCGCTTTT TCGACCCCGA GATGCAGGCC GCCGCCAGCC ACCGCAGCGC GCTGGAGGCC GACCTGCGCC GGGGCCTGCA ACAGCGGGAA CTGGTGCTGC ACTACCAGCC CATGGTCGAT GGCCAGGGCC GCCTGCAAGG CGCCGAAGCC CTGGTGCGCT GGAACCACCC GCAGCGGGGG CTGATGCCGC CGGCCGAATT CACCCCGCTG GCCGAGCAAA CGGGCCTGAT CCTGCCGCTG GGCCAATGGG TGTTGGAGAC CGCCTGCGCA CAGTTGGTGG CCTGGTCGCG CAGCGCGCTC ACGCGGGCGT TCTCCCTGTC GGTGAACGTC AGCGTGCGGC AGTTCCGCCA GGCCGATTTC GTGCAGCAGT TGCTGGCCAC GCTGGAGGCC AGCGGCGCCA ACCCCGAGCG CCTGACCATA GAGCTCACCG AAAGCCTGCT GCTGAACGAC GTGCAGGACA TCATCGCGCG CATGCAGCAA CTGCGCTGCC ACGGCCTGGG CTTCGCGCTC GACGACTTCG GCACCGGCTA CTCGTCGCTG AGCCAGCTCA AACGCCTGCC GCTGGACCAG ATCAAGATCG ACCGCAGCTT TGTGCGCGAC CTGCCCGCCG ACGCCGGCGA CGGCGCCATC GTGCGCAGCA TCCTGGCCCT GGCCCAGAGC CTGGGCCTGG CCGTGGTGGC CGAAGGGGTG GAGACCCGGG CGCAACTGGA GTTTTTGCAG CACCATGGCT GCCAGACATT CCAGGGCTAC CACTTCGGCC GCCCGATGCC GCCCGAAGCG CTGGCGCACA GGTTTCAGGT AGTGCCTGAC CCCCTCGGCA GACCCGTCTG A
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Protein sequence | MKTAAILWVD CDTQHAAAAQ QLISAQHPGW RLLHSPAPGQ ASRAWDAMVL CLDPAARELP DLREPCATHP VLLCLDAAQE ALAARAFRDG LGDYLLRAAD GQAHLAELMQ RLAALLRQRL AAQAPGAPNP SARMLALLQE QRAALQATLA SISQGIFKTG PDGRISVYNQ RALDLLDLPE SLLANRPTLA ELTRLQAERG DFGPDYGLVG PLGQDYLAQG GRDSAPAIYW RTTRDGRTLE VRTNALADGS QVRTFADVSD YLRVENQLRD SEARFRSLSD LSSDWYWEHD AQGRFTQLAG DLSVNGMPLS AVLGRTRWEI GALNMTEADW AAHRAVLAAQ QPFRDLELQR RRADGSMHWI SVSGVPVQGA DGTPRGYRGV GRDITGRKQA EGQIERLAFY DALTGLPNRR LLLDRLQHAT VAVTRSNTQG ALLFIDLDNF KSLNDTLGHD AGDHLLQQAA QRLKACVREV DTVARFGGDE FVVLLAGLSA AAAQASAEAA QVAKHIAASL GQPYALGGAV HHSTPSIGIA LFGPQACRVD ELLKQADLAM YQAKAAGRNT QRFFDPEMQA AASHRSALEA DLRRGLQQRE LVLHYQPMVD GQGRLQGAEA LVRWNHPQRG LMPPAEFTPL AEQTGLILPL GQWVLETACA QLVAWSRSAL TRAFSLSVNV SVRQFRQADF VQQLLATLEA SGANPERLTI ELTESLLLND VQDIIARMQQ LRCHGLGFAL DDFGTGYSSL SQLKRLPLDQ IKIDRSFVRD LPADAGDGAI VRSILALAQS LGLAVVAEGV ETRAQLEFLQ HHGCQTFQGY HFGRPMPPEA LAHRFQVVPD PLGRPV
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