Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1338 |
Symbol | |
ID | 4693032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1483590 |
End bp | 1484534 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639849109 |
Product | ornithine cyclodeaminase |
Protein accession | YP_996123 |
Protein GI | 121608316 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.175069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000124855 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCTTTGC CTGCCTTTTG CGCAACCACC GGCATGTTGG ATGCGGCGGC CACGGCGGCG CGCCTGCCCT GGTCCGGTCT GGCCGATGAA ATCGCCGCCC TGCTGCGCGA CGGCAGCGTG GCGGTCCCCG CCCGCAGCAT GCTGCCATTG GCGCATGGCG GCAGCCTGTT CGTGATGCCG GCCACCGACC ACAGCGTGGC GATGATCAAG CTCATCACCC TGACCCCCGG CAACGCCGGC ACCGGGCGCG CGTCGATACA GGGCGATGTG CTGGTGTTCG ACTGCGCCAC CGGCGAGCGC CGGCTGGTGC TCGACGGCCC CACCGTCACC GCGCGCCGCA CGGCGGCCGT CTCGCTGCTG GCCGCCCGGC TGTTGGCGCC GGCGCCGCAA GGCCCTTTGC TGATCGTCGG CGCCGGGGTG CAGGGCCGCT CCCATGCCGA GGCTTTCATT CAGGGCCTGG GGGTGCGCGA GGTCTGGGTG GCCTCGCGCA GCAGCGCCAG TGCCTTGGCC TTGGCCGCGC AGGTGCAGGC CCTGGGTGCC CAGGCCCGGG TGGTGGCCGA CGCGGATGCG GCCGCGCCCC ACTGCCCGCT GATCGTGACC TGCACCACCG CCCGGCGCGT GGTGCTGGCG GCCGCGCCGC GCCCCGATGC CTTTGTCGCC GCAGTGGGCG CCTTCACCCC GGCGATGCTG GAACTGGCCC CGGCGCTGTG CCGGCATCTG GCGCAGCAGG GGCAGATCGT GGTCGATTCC CCGGATGCCG GCCACGAGGC CGGCGATCTG CTGCAAGCCG GACTTGACGT GGCGGCCATG CCGGTGCTCG GGGATGTGGT GCAAGGCCGG TGGACGGCCG GCTCCGGGCC GGTGCTGTTC AAAAGCTGTG GCTGGGCCGG CTGGGATCTG GCCGCAGCGC GGCTGGCCAT GCGCACGGCC ATGCACGACG CATAG
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Protein sequence | MSLPAFCATT GMLDAAATAA RLPWSGLADE IAALLRDGSV AVPARSMLPL AHGGSLFVMP ATDHSVAMIK LITLTPGNAG TGRASIQGDV LVFDCATGER RLVLDGPTVT ARRTAAVSLL AARLLAPAPQ GPLLIVGAGV QGRSHAEAFI QGLGVREVWV ASRSSASALA LAAQVQALGA QARVVADADA AAPHCPLIVT CTTARRVVLA AAPRPDAFVA AVGAFTPAML ELAPALCRHL AQQGQIVVDS PDAGHEAGDL LQAGLDVAAM PVLGDVVQGR WTAGSGPVLF KSCGWAGWDL AAARLAMRTA MHDA
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