| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1327 |
|---|
| Symbol | |
|---|
| ID | 4692355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1472105 |
|---|
| End bp | 1472842 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639849098 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_996112 |
|---|
| Protein GI | 121608305 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.51669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00270426 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAG ACGATATCTT GCGTGTGGCA AGCTACAACA TCCACAAGGG AGTGCAAGGC
ATAGGCCCGG GGCGTCGGCT GGAAATCCAC AACCTGGGCC TGGCGATCGA GCAGCTCGAC
GCCGACATCG TCTGCCTGCA GGAAGTGCGC AAGCTGCACC GGCGCGAGCA AGCCTACTTT
CAGCGCTGGC CCGAACTGCC GCAGGCCCAA TTCCTGGCGC CCGAAGGCTA TGAAGCCGTG
TACCGCACCA ACGCCGTCAC CCGGCATGGC GAGCATGGCA ACGCACTGCT GTCGCGCTGG
CCCGTGATCG GGCACCAGCA TCAGGATCTG TCGGACCACC GCTTCGAGCA GCGCGGCCTG
CTGCATGTGC AGCTCGATGT CCATGGCCGG CCCCTGCACG TGATCGTGGT GCACCTGGGG
CTGATAGCGG GCAGCCGCAT GCGCCAGATC GAGCGGCTGC AAGGCTTCAT CGAGCGCGAG
GTGCCGTCCG CCGCGCCGCT GGTGGTGGCC GGGGACTTCA ACGACTGGGG CGTGCAGGTC
AAGCGCATGC TGGCCGGCTT TGCGCTGCTG GAGTTCGATG CGCCGCGCGC CTTTACCTAC
CCGGCACGGT TGCCGCTGGT GCAGCTCGAC CATGTGTATG CGCGCGGGCT GGCACCGCTG
TCGCTGCATG TGCCGCGAGG CCGGATCTGG TGGCGCATGT CGGACCACCT GCCGTTGATC
GCCGAATTCC GGCGCTGA
|
|---|
| Protein sequence | MEQDDILRVA SYNIHKGVQG IGPGRRLEIH NLGLAIEQLD ADIVCLQEVR KLHRREQAYF
QRWPELPQAQ FLAPEGYEAV YRTNAVTRHG EHGNALLSRW PVIGHQHQDL SDHRFEQRGL
LHVQLDVHGR PLHVIVVHLG LIAGSRMRQI ERLQGFIERE VPSAAPLVVA GDFNDWGVQV
KRMLAGFALL EFDAPRAFTY PARLPLVQLD HVYARGLAPL SLHVPRGRIW WRMSDHLPLI
AEFRR
|
|---|
| |