Gene Veis_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1324 
Symbol 
ID4690476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1469152 
End bp1469496 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content65% 
IMG OID639849095 
ProductFmdB family regulatory protein 
Protein accessionYP_996109 
Protein GI121608302 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00811436 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTATTT ACGCCTACCG ATGCGGCTCC TGCGGCCATG CCAAGGATGT GCTGCAAAAA 
CTCTCCGACC AGCCACTGAC GCGATGCCCG GCCTGCGGTG CCGAGGCTTT TGCCAAGCAG
CTGACGGCGG CGGGCTTTCA GCTCAAAGGC TCTGGTTGGT ACGTGACCGA TTTTCGTGGC
GGCAGCAGCG CGCCGGCCAA GACCGACGAC GCCAAAGCGG ACGCCAAGAC GGATGCCAAG
CCTGAAGCCG CCGGCACCGG CACCGGCGCT GCTGCGGAAA AAGCAGCGCC GAGCGCAAGC
ACCTCCAGCG CCAGCAGCAG TTCTTCTTCT GCCCCGTCGA ACTGA
 
Protein sequence
MPIYAYRCGS CGHAKDVLQK LSDQPLTRCP ACGAEAFAKQ LTAAGFQLKG SGWYVTDFRG 
GSSAPAKTDD AKADAKTDAK PEAAGTGTGA AAEKAAPSAS TSSASSSSSS APSN