Gene Veis_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1301 
Symbol 
ID4691455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1439417 
End bp1440631 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID639849073 
Productamidohydrolase 
Protein accessionYP_996087 
Protein GI121608280 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.855359 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGTT CACGTCTGAA AGCGGGTGGC CGCCCGTTTG CGCATATCGC CCAATACCAC 
CCTGAACTGA CCGCGCTGCG GCGCGATCTG CATGCCCATC CCGAACTGGG CTTCGAGGAG
CGCTACACCA GCCAGCGCGT GCAGGAGGCC CTCCACCTGT GCGGTGTCGA CGAGATCCAT
CGCGGCATGG GCCGCACCGG CGTGGTCGGC GTGATCCGGG GGCACGGCCA CTCCAGCGGC
AGCATGGTGG GGCTGCGCGC CGACATGGAT GCCTTGCCGA TGACCGAGCA CAACGACTTC
GCCTGGAAGT CGTGCAAACC CGGGTTGATG CACGGCTGCG GCCATGACGG CCACACCGCG
ATGCTGCTCG GCGCCGCGCG CTATCTGGCC GAAACCCGCA ACTTCGACGG CACGGCGGTG
CTGGTGTTCC AGCCGGGCGA AGAAGGCTTT GCCGGCGCCC GCGCGATGAT CGACGACGGC
CTGTTCGAGC GGTTTCCGGT GCAGTCGATC TTTGCCATGC ACAACTGGCC GGCGCTCAAG
CCCGGCACCG TGGGCCTGAA CTCCGGCCCG ATGATGGCGG CGGCCGACCG CTTCACCGTC
GAGATCACCG GCCGGGGCGG CCATGGCGCC CATGCCTACC AGACGGTCGA TGTGGTGCTG
GTGGCGGCGC ACATCATCAC CGCCGCGCAG AGCATCGTGG CGCGCAATGT GCGCCCGATC
GACAGCGCCG TGGTCAGCCT GTGCGCCGTG CAGGCGGGCG ACTTGGGCGC GTTCAGCGTG
CTGCCTGGCT CGGCCACGCT GGTCGGCACC GTGCGCACCT TCGATCCGCA GGTGCAGGAG
ATGGTGGAAA GGCACCTCAA GGAGCTGTGC CACGCCATTG CCCTGGGCTT TGGCGCCACG
GCCAGCGTGC ATTACGAGCG CATCTACCCG GCCACGATCA ACAGCGAGAG CGAAGCCTCG
TTTGCCGGCG ATGTGGCGCA ATCGCTGCTG GGCGCCGAGC ATGTGCTGCG CGACCTGGAG
CCGAGCATGG GATCGGAGGA TTTTTCGTTC ATGCTCCAGA CCAAGCCCGG CGCCTATCTG
CGCATCGGCC AGGGCGCTGG CGCGGGCGGC GGCCTGCACA ACAGCCGCTA CGACTTCAAT
GACGACATCC TGCCGCTGGG CGCCGCGCTG CATGCCAGCC TGATCGAGCA GGCCATGCCT
TTGGCGACGC CCTGA
 
Protein sequence
MPGSRLKAGG RPFAHIAQYH PELTALRRDL HAHPELGFEE RYTSQRVQEA LHLCGVDEIH 
RGMGRTGVVG VIRGHGHSSG SMVGLRADMD ALPMTEHNDF AWKSCKPGLM HGCGHDGHTA
MLLGAARYLA ETRNFDGTAV LVFQPGEEGF AGARAMIDDG LFERFPVQSI FAMHNWPALK
PGTVGLNSGP MMAAADRFTV EITGRGGHGA HAYQTVDVVL VAAHIITAAQ SIVARNVRPI
DSAVVSLCAV QAGDLGAFSV LPGSATLVGT VRTFDPQVQE MVERHLKELC HAIALGFGAT
ASVHYERIYP ATINSESEAS FAGDVAQSLL GAEHVLRDLE PSMGSEDFSF MLQTKPGAYL
RIGQGAGAGG GLHNSRYDFN DDILPLGAAL HASLIEQAMP LATP