Gene Veis_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1287 
Symbol 
ID4694273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1423510 
End bp1424916 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content68% 
IMG OID639849059 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_996073 
Protein GI121608266 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCCA CGCAATCGAT GGGCGCGCCT GCCGCACCCC CGGGTTTCCA AAAAAACTTC 
GCTCTCCGCA TGTTGTGGCG CATTTCATAT TGTCTGCTGT GGCAGTTGGT CGGCGGCGCC
CTGGGCTGGT GGCAGAGCGG CCCCTGGGGC GCTGCGCTGG GGGCTGCGCT GGCGGCCTGG
GCCTGGTCCG TCCGGGACTT CGTGCGCGGC GCGCGGGTGC TGCATTGGCT GCGCACCGGC
GACCTGGCCG ACGCCCCGGT GGTGCACGGC ATCTGGGGCG AAGCCGCAGA CCGTGCGCTG
CGCCTGCTGC GCAGGCAGCA AGCCCGGATC CAGAGCAGCC AGGACCGGCT GCAGGAAATC
CTGACCGCAC TCCAGGCCTC GCCCAACGGC GTGGTCTTGC TCGACGCCCA GGGGCGCATC
GAATGGTGCA ACCAGACGGC GGCCAACCAT TTCGGCTTTG ACGCCCAGCG CGATGTCATG
CAATCGATCG GCAACCTGCT GCGCAACCCC GAATTCACCG CCTACTATGC GGTCAAGGAC
TTCTCCGCCG CCGTGGTGCT GGAGGGGCGC GCGAGCACGC CGTCGCGGCC GGTGCGCATC
TCGGTGCACC TGCACCCCTA CGGCGACGGC TGCACCCTGC TGCTCTCGCG CGATGTCACG
GCGCTGGAGC AGGCCGAGGC CATGCGGCGC GACTTCGTGG CCAATGTGTC GCACGAAATC
CGCACCCCGT TGACCGTGCT GATCGGCTTC GTCGAAACCT TGCAGACCCT GCCTCTGAGC
GCCGAGGAGC GCTCCCGCTA CCTGGGCCTG ATGGCGCAAC AGGCGCTGCG CATGCAAAAC
GTGGTGCAGG ACCTGCTCAC CCTGTCGCGC CTGGAAGGCA GCCCACCGCC CGGCATGGCC
GAATGGACGC CGGTGCAATC GCTGCTACAG CGCTGCGAAG ACGAGGGCCG CGCCTTGTCC
GCCCTGCTCA CGCAGCACCA GCCGCATCTG CTGCGCTTTC CGGCGCCGGA GGTCTTGCGC
GCCCAGGGCG ACATCGCCGG AGTACCCGCC GAATTGCAAA GCGCCCTGTC CAACCTGATC
AACAACGCCG TGCGCTACAC GCCCGCAGGC GGCTGCATCA GCGTGCAATG GAAGCGCGAG
CCTGACGGCC GCGCAGTCTT TTCGGTGCAT GACACCGGCC CCGGCATTGC GCCCGAACAT
ATACCGCGCC TGACCGAGCG CTTTTACCGC GTGGACCGCA GCCGATCGCG CGAAACCGGT
GGCACGGGCC TGGGGCTGGC CATCGTCAAA CATGTGCTGC AACGCCATGG CGCCACGCTG
GACATCAACA GTACCCTGGG CAAAGGCTCG GCGTTTTCGG TCACCTTCCC GGCCAACCGG
CTGCGCGGCT TTGCGCCGTC GACATGA
 
Protein sequence
MVPTQSMGAP AAPPGFQKNF ALRMLWRISY CLLWQLVGGA LGWWQSGPWG AALGAALAAW 
AWSVRDFVRG ARVLHWLRTG DLADAPVVHG IWGEAADRAL RLLRRQQARI QSSQDRLQEI
LTALQASPNG VVLLDAQGRI EWCNQTAANH FGFDAQRDVM QSIGNLLRNP EFTAYYAVKD
FSAAVVLEGR ASTPSRPVRI SVHLHPYGDG CTLLLSRDVT ALEQAEAMRR DFVANVSHEI
RTPLTVLIGF VETLQTLPLS AEERSRYLGL MAQQALRMQN VVQDLLTLSR LEGSPPPGMA
EWTPVQSLLQ RCEDEGRALS ALLTQHQPHL LRFPAPEVLR AQGDIAGVPA ELQSALSNLI
NNAVRYTPAG GCISVQWKRE PDGRAVFSVH DTGPGIAPEH IPRLTERFYR VDRSRSRETG
GTGLGLAIVK HVLQRHGATL DINSTLGKGS AFSVTFPANR LRGFAPST