| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1270 |
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| Symbol | rpsC |
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| ID | 4691093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1409049 |
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| End bp | 1409933 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639849042 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_996056 |
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| Protein GI | 121608249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00251085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA AAATCCATCC TACCGGCTTT CGCCTTGCGG TCAGCCGCAA CTGGGCCAGC
CGTTGGTACG CCGACAACCG CGATTTCGCC GGCATGCTGG CCGAAGACAT CAAGGTGCGC
GAGTACCTCA AGACCAAGCT CAAGAACGCC GCCGTCTCGC GCATCCTGAT CGAGCGCCCG
GCCAAGAACG CGCGCATCAC CATTTACTCG GCCCGTCCCG GTGTGGTGAT CGGCAAGAAA
GGCGAAGACA TCGAGAGCCT GAAAAAGGAA CTCGCCGTGC GCCTGGGCGT GCCGGTGGCA
GTGAACATCG AAGAAGTGCG CAAGCCGGAA ATCGACGCCA AGCTGATCGC CGACAGCATC
ACGCAGCAGT TGGAAAAGCG CATCATGTTC CGCCGCGCGA TGAAGCGCGC GATGCAAAAC
GCGATGCGTC TGGGGGCACA GGGCATCAAG ATCATGTCGT CCGGCCGGCT CAACGGCATC
GAAATCGCGC GTTGCGAGTG GTACCGCGAA GGCCGCGTGC CGCTGCACAC GCTGCGTGCG
GACATCGACT ACGGCACCTC GGAAGCCAAG ACCACCTATG GCGTGATCGG CGTCAAGGTC
TGGGTCTACA AAGGCGACAC GCTGGGCCGC AACGACCTGC CCGCCGTGGA AACCCCGCGC
CCGGACGAAG AGCGCCGCCC ACGCGGCCCA CGCCGTGATG GCCGCCCCGG CGGCGACCGT
TCGGGCGCAG GCCGTGGACC GCGTCGCCCT GCCGCTGGCA ACAGCGCGCC GGCCGATGGC
AGCGACAAGC CGGCTGGCGC CGGGGGCGCT GACAACACCG CCGTCAAGCG CGTGCGCAAA
GTCGCCGCGC CTGCGGCACC CGCTGCGGAC GTAAAGGGAG AATAA
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| Protein sequence | MGQKIHPTGF RLAVSRNWAS RWYADNRDFA GMLAEDIKVR EYLKTKLKNA AVSRILIERP
AKNARITIYS ARPGVVIGKK GEDIESLKKE LAVRLGVPVA VNIEEVRKPE IDAKLIADSI
TQQLEKRIMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGI EIARCEWYRE GRVPLHTLRA
DIDYGTSEAK TTYGVIGVKV WVYKGDTLGR NDLPAVETPR PDEERRPRGP RRDGRPGGDR
SGAGRGPRRP AAGNSAPADG SDKPAGAGGA DNTAVKRVRK VAAPAAPAAD VKGE
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