Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1267 |
Symbol | rplB |
ID | 4690526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | + |
Start bp | 1407583 |
End bp | 1408407 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639849039 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_996053 |
Protein GI | 121608246 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000012359 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGTCA TCAAGATGAA ACCCACCTCG CCCGGGCGCC GCGCCGTGGT GAAGGTCACG CGGGAGCACC TGCACAAGGG CCAGCCCCAT GCCCCGCTGC TGGAGCCCCA GTTCCAGAAA GCGGGCCGCA ACAACAACGG CCACATCACC ACCCGCCACA AGGGCGGTGG TCACAAGCAC CACTACCGGG TGGTGGACTT CAAGCGCAAC AAGGACGGCA TTGCGGCCAA GGTCGAGCGC ATCGAGTACG ACCCGAACCG CACGGCCCAT ATCGCGCTGG TGTGCTACGC CGACGGTGAA CGGCGCTACA TCATCGCGCC GCGCAACCTG GAAGTGGGCG CCACGCTGCT GTCCGGCGCG GAGGCCCCGA TCCGCGCCGG CAACACGCTG CCGATCCGCA ACATCCCCGT GGGTTCGACC ATCCACTGCA TCGAGCTCAA GCCCGGTGCC GGCGCGCAGA TCGCCCGCTC GGCCGGCGCC TCGGCCACGC TGCTGGCGCG CGAAGGCACC TACGCCCAAG TGCGCATGCG CTCGGGCGAG GTGCGCAAGA TCCACATCGA ATGCCGCGCC ACCATCGGCG AGGTGGCCAA CGAAGAGCAC AGCCTGCGCC AACTGGGCAA AGCCGGGGTC AAGCGCTGGA TGGGGATCCG TCCCACGGTG CGCGGCGTGG CCATGAACCC GGTGGATCAC CCGCACGGTG GCGGCGAAGG CCGCACCGGT GAAGGCCGCC ATGCCGTCGA TCCCTGGGGC AATCTGACCA AGGGTTATCG CACCCGCAAC AACAAGCGCA CACAGAGCAT GATCGTGTCG CGTCGCAAGA AGTAA
|
Protein sequence | MAVIKMKPTS PGRRAVVKVT REHLHKGQPH APLLEPQFQK AGRNNNGHIT TRHKGGGHKH HYRVVDFKRN KDGIAAKVER IEYDPNRTAH IALVCYADGE RRYIIAPRNL EVGATLLSGA EAPIRAGNTL PIRNIPVGST IHCIELKPGA GAQIARSAGA SATLLAREGT YAQVRMRSGE VRKIHIECRA TIGEVANEEH SLRQLGKAGV KRWMGIRPTV RGVAMNPVDH PHGGGEGRTG EGRHAVDPWG NLTKGYRTRN NKRTQSMIVS RRKK
|
| |