Gene Veis_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1254 
Symbol 
ID4694060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1395608 
End bp1396816 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID639849026 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_996040 
Protein GI121608233 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.814321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACT CGTATCTTTT TTTCGAGCCG CCCCACCCCA TGAAACGCAT CCTGTCCGTG 
CTACGCCCCC TGGCCATCTT GGCTGCGCTG GCCCCTGCTG CCTTCGGTGC CCACGCCCAG
GCGCCACAGC CGCCCGAAAT CGCCGCGCGC GCCTATATCC TGCTGGATGT CACCGCCAAC
CAGGTGCTGG CGGCCAAGAA CATCGACGCG CCGGTGGAAC AGGCCTCGCT GACCAAGCTG
ATGACGGCCT ATCTGGTGTT CGACGCACTG CGCGCCGAAA AAATATCGCT CCAGCAAAAT
CTGCCCGTGA GCGAGCGCGC CTGGAAGATG CCCGGCTCGC GCATGTTCAT CGACCCCACG
ATGCAGGTGC CGGTCGAAGA TCTGCTCAAG GGCATGATCG TCCAGTCGGG CAACGACGCC
GCCATGGCCC TGGCCGAAGG CGTGGGCGCC ACGGCCGAGA ACTTCGTCAA ACTGATGAAC
GAACAGGCCA AGGCCCTGGG CATGCAGAGC ACGAGCTACA AAAACCCCGA GGGTCTGACC
GAGCCTGGCC ACCTGTCGAC GGCGCGCGAT CTGGGCCTGC TGGCCACGCG CCTGATGAAG
GACTTCCCGC AGCACATGCA TTACTACGCC ACCAAGCAGT ACAGCTACCC CGGCACGCCG
GCCAGCAACG CCAACAACCG CAACACGCTG CTGTACCGCG ACCCGACCGT GGATGGCCTC
AAGACCGGGC ACACCGCCGC TGCGGGCTAC TGCCTGGTGG CCACCGCCAA GCGCGAGTTC
CCCGGCCTGG GCCAGCGCCG TCTGCTGTCC ATCATGTTGG GCGCGGCCAG CGAAAGCGCG
CGTGCCAACG AAAGCCAGAA ACTGCTGAAC TGGGGTTACA CCGCGTTCGA GGCCGTCAAG
CTGTTCGATG CCGGCCAGCC GGTGGCAACG CCGGCGGTCT GGAAGGGTCG GACGAGCCAG
CTCAAGATCG GCCATGAAGA GGCCATCGTC ATGACCGTGC CCGCAGGCAG CACCGGCAGG
ATCACCACCC GGATCGCACG CCCCGACCCG CTGGTCGCCC CATACACCAA GGGCCAGTCG
ATCGGCACCT TGCAGGTGAT GCTCGGTGAC CAGACGCTGG GCGAGGTGCC GCTGGTGGCG
CTCGAAGACG TGCAGGAGGC CGGCATTCTG GGCCGTGCCT GGGATGCGAT CCGGCTGTGG
ATCAAGTAG
 
Protein sequence
MRNSYLFFEP PHPMKRILSV LRPLAILAAL APAAFGAHAQ APQPPEIAAR AYILLDVTAN 
QVLAAKNIDA PVEQASLTKL MTAYLVFDAL RAEKISLQQN LPVSERAWKM PGSRMFIDPT
MQVPVEDLLK GMIVQSGNDA AMALAEGVGA TAENFVKLMN EQAKALGMQS TSYKNPEGLT
EPGHLSTARD LGLLATRLMK DFPQHMHYYA TKQYSYPGTP ASNANNRNTL LYRDPTVDGL
KTGHTAAAGY CLVATAKREF PGLGQRRLLS IMLGAASESA RANESQKLLN WGYTAFEAVK
LFDAGQPVAT PAVWKGRTSQ LKIGHEEAIV MTVPAGSTGR ITTRIARPDP LVAPYTKGQS
IGTLQVMLGD QTLGEVPLVA LEDVQEAGIL GRAWDAIRLW IK