Gene Veis_1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1242 
Symbol 
ID4691292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1377925 
End bp1378710 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID639849015 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_996029 
Protein GI121608222 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGC CCTACCTGCT GGTGTTCGTG GTGTTCGTGC TCTACCCGGT GGGGTATGGA 
CTGTGGCTGG CGCGCCATCC GCAAAGCTAT GTGCAACTGG TCGAAGACCC GATTTTCTTG
CGCTCGGTGA TCAACACGGC CATTTTCCTG GCCGTGGCGA TCAACCTGAA AATGCTCATG
GCGTTGCTGC TCTCGGGCTT TTTCGTGCAG TCGCGCTGGT GGATCAAGAT CGTTTCGGCG
ATTTTCATCC TGCCCTGGGC GATGCCGTCG ATTCCGACCA TCTTGTCGAT CCGCTTCATG
CTCAACCCCG AGTGGGGCGT GATCAACAGC ACCATCTTCC GGCTGACCGG CGCTGACGGG
CCGAACTGGC TCAATGACCC CGCGCTGGCA CTGAGCTTGG CGATGGTGGT GCATGTGTGG
AAGTCGCTGC CGTTCTGGAC GCTGATTCTC GTGGCGGGGC GGCTGGCGAT TGCTTCGGAG
CAGTACGAGG CCGCGTCGGT CGACGGCGCC TCGTCGTGGC AGAAGTTTCG CTTCGTGAGC
TGGCCGGCGC TCAAGACGCT CTACATCACC TCGACCATCT TGTCGATGAT CTGGACCCTG
GGCGACTTCA ACAGCGTCTA TCTGCTGACC GGCGGCGGCC CTGCGGACTT GACGCAGGTG
CTGGCCACAC TCGGCATCCG TTACCTGCGG CTCGACCAGG TCGGCCTGTC GATGGCGTCG
ATCGTGGTGG CGTTGCCTCT GGTCTTGCCT CTGGTGTACT TCATGATGAA GAGGCTCTCG
AAATGA
 
Protein sequence
MVVPYLLVFV VFVLYPVGYG LWLARHPQSY VQLVEDPIFL RSVINTAIFL AVAINLKMLM 
ALLLSGFFVQ SRWWIKIVSA IFILPWAMPS IPTILSIRFM LNPEWGVINS TIFRLTGADG
PNWLNDPALA LSLAMVVHVW KSLPFWTLIL VAGRLAIASE QYEAASVDGA SSWQKFRFVS
WPALKTLYIT STILSMIWTL GDFNSVYLLT GGGPADLTQV LATLGIRYLR LDQVGLSMAS
IVVALPLVLP LVYFMMKRLS K