Gene Veis_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1236 
Symbol 
ID4690808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1372920 
End bp1373552 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID639849009 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_996023 
Protein GI121608216 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TGCATATCAA CGCCTCGACA CGCGGCGAAA ACAGCGAATC CCTGAAAATG 
GCCAACACCT TCATTGCGGA GGTGCGCAAC CATACGCAAT TGGAGCTCGA CACATTCAAT
CTGTTTGATG ACAAACTGCC GGAATTCGAC GGACTTGCCG TGGGCGCCAA GATGGCACTG
TTCTCCGGCA GCGGCTTCAG TAGCGCACAA ACAAAAGTCT GGGAAGAGAT GAAACAAATT
TTCGATCGCT TCGCCCGCGC AGACGCGTAC ATTTTCAACA CCCCGCTATG GAACAACGGG
ATTCCGTATA AACTGAAACA GTTCATCGAT GTCGTTACCC AACCCGGATG GGCATTTGGA
TTCGATGTCG AAAAAGGGTA TTCGGGCTTG CTGCATGGGA AAAAAGCCCT CGTCATACAC
GCCAGCGGCG TGTACCACGC TGCAATAGCA GCGGGTTTCG GATCAGACTT TTCCACCCCT
TATGTGGATG ACTGGCTCAA ATTCATCGGG GTTCAATCGG TCGCGCATAT TCATGTCGCG
CCAACCGTCG TGAATACCGA CTTCGCCAAG ACAAAAGCGA ATGCGGAAAT CGATGCGCGA
AAAGTAGCCA GGGAATGGGC GTCCAAGGCG TAA
 
Protein sequence
MKLLHINAST RGENSESLKM ANTFIAEVRN HTQLELDTFN LFDDKLPEFD GLAVGAKMAL 
FSGSGFSSAQ TKVWEEMKQI FDRFARADAY IFNTPLWNNG IPYKLKQFID VVTQPGWAFG
FDVEKGYSGL LHGKKALVIH ASGVYHAAIA AGFGSDFSTP YVDDWLKFIG VQSVAHIHVA
PTVVNTDFAK TKANAEIDAR KVAREWASKA