Gene Veis_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1232 
Symbol 
ID4691137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1370161 
End bp1370466 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content58% 
IMG OID639849006 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_996020 
Protein GI121608213 
COG category[S] Function unknown 
COG ID[COG3512] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATGC TGGTGATGTT CGATTTGCCG GTGGTAGAAA AAGCCGAGCG CCAAGCGGCC 
ACGCAGTTTC GCAACGCGCT GCTCGACATG GGCTTCGAGA TGAGCCAGTT CAGCGTGTAC
ATGCGCTTTT GCGCCAGCCA GACCCAAGTG GACACCCTGT GCCGCACAGT GGAGCGCGCC
TTGCCTTCCG GCGGCAAAGT GCATATCTTT CAGTTCACAG ACAAGCAATA CGAACGCGCC
ATCACCTACC GCGGACGTAG CAGGCAACCC ACGCAAAAAG CGCCGGATCA GTTCGACCTT
TTTTAG
 
Protein sequence
MWMLVMFDLP VVEKAERQAA TQFRNALLDM GFEMSQFSVY MRFCASQTQV DTLCRTVERA 
LPSGGKVHIF QFTDKQYERA ITYRGRSRQP TQKAPDQFDL F