Gene Veis_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1217 
Symbol 
ID4691906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1352234 
End bp1352902 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content60% 
IMG OID639848991 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_996005 
Protein GI121608198 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACC TGGACCTTTC CTTCTACAAC CAGGAACTGA TCTCCAACTT CGTGCTCAAG 
GGGCTGTACT TCAGCCTGCA GCTGACCTTG GAGGCCGCCA TCGGCGGCAT ACTGCTTGGC
ACCCTGCTGG CGCTGATGCG TCTGTCGGGC AAAAAATGGC TGGAAATGCC TGCGGCCATC
TACGTCAATG GCATGCGCAG CATTCCGCTG GTGATGGTGA TCCTGTGGTT CTTTTTGCTG
ATGCCTGCGA TCATCGGTCG GCCCATCGGC GCCGAAGTGT CGGCCGTCAT CACCTTCATC
GCTTTCGAGG CGGCTTACTT CAGCGAGATC ATGCGCGCCG GCATTGCGGC GATACCGCGT
GGCCAGGTGC ATGCCGGCCA GGCCCTGGGC ATGACCTATG CCCAGAACAT GCAACTGGTG
CTGCTGCCGC AGGCCCTGCG CAACATGCTG CCGGTGCTGC TGACGCAGAT CATCATCTTG
TTCCAGGACA CATCGCTGGT CTACGCCATC GGTGCTTACG ACCTGCTCAA GGGCTTTGAA
TTGGCGGGCA AGAACTTCGG GCGCCCCATC GAAGCCTATC TGGCGGCGAC GGTGCTGTAC
TTTGCGCTGT GCTTTACGCT GTCCTGGCTG GTCAAACGCC TGCACCGCAA GATCGCGATC
ATCCGCTGA
 
Protein sequence
MMNLDLSFYN QELISNFVLK GLYFSLQLTL EAAIGGILLG TLLALMRLSG KKWLEMPAAI 
YVNGMRSIPL VMVILWFFLL MPAIIGRPIG AEVSAVITFI AFEAAYFSEI MRAGIAAIPR
GQVHAGQALG MTYAQNMQLV LLPQALRNML PVLLTQIIIL FQDTSLVYAI GAYDLLKGFE
LAGKNFGRPI EAYLAATVLY FALCFTLSWL VKRLHRKIAI IR