Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1217 |
Symbol | |
ID | 4691906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1352234 |
End bp | 1352902 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639848991 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_996005 |
Protein GI | 121608198 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACC TGGACCTTTC CTTCTACAAC CAGGAACTGA TCTCCAACTT CGTGCTCAAG GGGCTGTACT TCAGCCTGCA GCTGACCTTG GAGGCCGCCA TCGGCGGCAT ACTGCTTGGC ACCCTGCTGG CGCTGATGCG TCTGTCGGGC AAAAAATGGC TGGAAATGCC TGCGGCCATC TACGTCAATG GCATGCGCAG CATTCCGCTG GTGATGGTGA TCCTGTGGTT CTTTTTGCTG ATGCCTGCGA TCATCGGTCG GCCCATCGGC GCCGAAGTGT CGGCCGTCAT CACCTTCATC GCTTTCGAGG CGGCTTACTT CAGCGAGATC ATGCGCGCCG GCATTGCGGC GATACCGCGT GGCCAGGTGC ATGCCGGCCA GGCCCTGGGC ATGACCTATG CCCAGAACAT GCAACTGGTG CTGCTGCCGC AGGCCCTGCG CAACATGCTG CCGGTGCTGC TGACGCAGAT CATCATCTTG TTCCAGGACA CATCGCTGGT CTACGCCATC GGTGCTTACG ACCTGCTCAA GGGCTTTGAA TTGGCGGGCA AGAACTTCGG GCGCCCCATC GAAGCCTATC TGGCGGCGAC GGTGCTGTAC TTTGCGCTGT GCTTTACGCT GTCCTGGCTG GTCAAACGCC TGCACCGCAA GATCGCGATC ATCCGCTGA
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Protein sequence | MMNLDLSFYN QELISNFVLK GLYFSLQLTL EAAIGGILLG TLLALMRLSG KKWLEMPAAI YVNGMRSIPL VMVILWFFLL MPAIIGRPIG AEVSAVITFI AFEAAYFSEI MRAGIAAIPR GQVHAGQALG MTYAQNMQLV LLPQALRNML PVLLTQIIIL FQDTSLVYAI GAYDLLKGFE LAGKNFGRPI EAYLAATVLY FALCFTLSWL VKRLHRKIAI IR
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