Gene Veis_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1216 
Symbol 
ID4691979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1351454 
End bp1352191 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID639848990 
ProductABC transporter related 
Protein accessionYP_996004 
Protein GI121608197 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGAAC TCAGGAACGT ATCCAAATGG TATGGCCCGG TGCAGGTGCT CGACGACTGC 
TCGGCCTCGA TCAACAAGGG CGAAGTGGTG GTGGTGTGCG GGCCTTCCGG CTCGGGCAAG
TCCACGCTGA TCAAGGCCAT CAACGCGCTG GAGCCTTTTC AGAAGGGCGA AATCACGGTC
GACGGCATCC GGCTGCACGA CCCCCGCACC GACCTGCCCA AACTGCGCAG CCGCGTGGGC
ATGGTGTTCC AGCACTTCGA GCTGTTTCCG CACCTGTCCG TGATGCAGAA CCTGACCATC
GCGCAGATCA AGGTGCTCGG CCGCAACCCG GACGATGCCA AAAAGCGCGG CCTGGCGATG
CTCGACCGGG TGGGGCTCGT CGCCCACAAG GACAAGTATC CGGGCCAGCT CTCCGGCGGC
CAGCAGCAGC GCGTGGCGAT TGCGCGGGCG CTGTCGATGG ACCCGATCGT GATGCTGTTC
GACGAGCCTA CCTCGGCCCT CGACCCCGAG ATGGTCGGCG AAGTGCTCGA CGTGATGGTC
GGCCTGGCCC ACGAAGGCAT GACCATGATG TGCGTGACGC ACGAGATGGG CTTTGCCCGC
AAGGTCAGCC ACCGCGTGAT CTTCATGGAC GTGGGCGGCA AAATCCTGGA GGACTGCCCC
AAGGACGACT TCTTCAACAA CCTCGATGCA CGCCAGCCGC GCACCAAGGA TTTTCTCAAC
AAGATCTTGT CGCACTGA
 
Protein sequence
MIELRNVSKW YGPVQVLDDC SASINKGEVV VVCGPSGSGK STLIKAINAL EPFQKGEITV 
DGIRLHDPRT DLPKLRSRVG MVFQHFELFP HLSVMQNLTI AQIKVLGRNP DDAKKRGLAM
LDRVGLVAHK DKYPGQLSGG QQQRVAIARA LSMDPIVMLF DEPTSALDPE MVGEVLDVMV
GLAHEGMTMM CVTHEMGFAR KVSHRVIFMD VGGKILEDCP KDDFFNNLDA RQPRTKDFLN
KILSH