| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1210 |
|---|
| Symbol | trpD |
|---|
| ID | 4690404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1345581 |
|---|
| End bp | 1346621 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848985 |
|---|
| Product | anthranilate phosphoribosyltransferase |
|---|
| Protein accession | YP_995999 |
|---|
| Protein GI | 121608192 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.747411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGC CCATGCCCAT CACCGCCCAG CAAGCGCTGC AGCGCACCAT CGAACACCGC
GAAATCTTCC ACGACGAAAT GCTGCACCTG ATGCGCATGA TCATGAACGG CGAACTCTCG
CCGGCCATGA CCGCTGCCAT CATCACCGGC CTGCGCGTGA AGAAGGAAAC CATCGGCGAG
ATCACGGCCG CCGCGCAGGT GATGCGCGAG TTCTCGACCA AGGTCCAAGT GCCCGATCGC
AAGCATCTGG TGGACATCGT CGGCACCGGC GGCGACGGCG CCAGCACCTT CAACATCTCC
ACCTGCGCGA TGTTCGTGGC AGCGGCTGCC GGCGCCAAGG TCAGCAAGCA CGGCGGCCGC
AGCGTTTCGA GCAAGAGCGG CAGCGCCGAC GTGATGGAGG CCCTGGGCAT CCACATCCAC
CTTGCGCCCG AGGCCATTGC CCGGTGCATT GCCGAGGTCG GCATCGGCTT CATGTTCGCG
CCCAACCACC ACCCGGCAAT GAAGAACGTG GCGCCGGTGC GCAAGGAACT GGGCGTGCGC
ACCATCTTCA ACATCCTGGG GCCGCTGACC AACCCGGCAG AGGCCCCCCA TGTCCTGGTG
GGCGTGTTCC ACCCCGACCT GGTCGGCATA CAGGTGCGCG CGCTGCAACG CCTGGGCGCC
GAGCATGTGC TGGTCGTCTA CGGCCGTGAC GGCATGGACG AAGCCAGTCT GGGCGCAGCC
ACGCTGGTGG GCGAACTCAA GAACGGCCAG ATCAGCGAAT ACGACATCCA CCCCGAGGAC
TTCGGGCTGG CCATGACCAG CAACCGGGCG CTCAAGGTCG ACACGCCCGA GCAGTCGCGC
GACATGCTGC TCGGCGTGCT GCGGGGCCAG CCCGGGGCCG CACATGACAC CGTCTGCCTG
AACGCCGGCG TGGCGCTGTA CGCGGCCAAT GTGGCCGAAT CGATCGCGGC GGGCCTGGCG
CTGGCGCGCG CTGCGATTGC CTCGGGCGCG GCGCTGGCCA AGCTCGAACA GTTGGTCGCG
CGCACACATG CGCTGGCCTG A
|
|---|
| Protein sequence | MPMPMPITAQ QALQRTIEHR EIFHDEMLHL MRMIMNGELS PAMTAAIITG LRVKKETIGE
ITAAAQVMRE FSTKVQVPDR KHLVDIVGTG GDGASTFNIS TCAMFVAAAA GAKVSKHGGR
SVSSKSGSAD VMEALGIHIH LAPEAIARCI AEVGIGFMFA PNHHPAMKNV APVRKELGVR
TIFNILGPLT NPAEAPHVLV GVFHPDLVGI QVRALQRLGA EHVLVVYGRD GMDEASLGAA
TLVGELKNGQ ISEYDIHPED FGLAMTSNRA LKVDTPEQSR DMLLGVLRGQ PGAAHDTVCL
NAGVALYAAN VAESIAAGLA LARAAIASGA ALAKLEQLVA RTHALA
|
|---|
| |