Gene Veis_1209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1209 
SymboltrpC 
ID4690362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1344753 
End bp1345556 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID639848984 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_995998 
Protein GI121608191 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA TCCTCGACCA GATCATGGCC GCCAAACGCG CCGAAGTGGC TGCGGCCCAA 
AAGCGCGTGC CCCTGGCCGC GGTGCGTGCC GACGCCGAAA GCCGCGTGCT CACCCGCGAC
TTTGAAGGCG CGCTGCGCGC CAAAATCAGC CAAGGCCAGG CGGCGGTGAT TGCCGAAATC
AAGAAGGCCA GCCCCAGCAA GGGCCTGCTG CGCGCCGACT TCATTGCCGC CGACATCGCG
CAAAGCTATG CCGAAGGCGA CGCCGGCGTG AGCGCGGCCT GCCTGTCGGT GCTGACCGAC
CAGGCGTTCT TCCAGGGCAG CATCGACTAC CTCAAACAGG CCCGCGCCAG TTGCCAACTG
CCGGTGCTGC GCAAGGACTT CCTGCTCGAT CCCTATCAGG TCTACGAAGC CCGCGCGATG
GGTGCAGACG CCATCTTGCT GATCGCCGCC TGCCTGGACG ACGCGCAACT GGCCGACTTC
GAGGCCATCG CCCGCAGCCT GGACATGGCG GTGCTGCTGG AAGTGCACGA CCGCCCCGAA
CTCGAGCGCG CGCTGGCCCG CTGCAAAACC CCGCTGGTGG GCATCAACAA CCGCAACCTG
CGCAGCTTCG AGGTCAGCCT GTCAACCACG CTGGACATGC TCGCTGACAT GCCGCCAGAG
CGCCTGCCGG TCACCGAATC CGGCATCCTG ACGCCGCAGG ATGTCAAAAC CCTGCGCGAC
GCCGGCGTGC AAGCCTTCCT GGTCGGCGAA GCCTTCATGC GCGCAGCCGA CCCGGGCCTG
GCGCTGGCCC GGTTGTTTGC CTGA
 
Protein sequence
MNDILDQIMA AKRAEVAAAQ KRVPLAAVRA DAESRVLTRD FEGALRAKIS QGQAAVIAEI 
KKASPSKGLL RADFIAADIA QSYAEGDAGV SAACLSVLTD QAFFQGSIDY LKQARASCQL
PVLRKDFLLD PYQVYEARAM GADAILLIAA CLDDAQLADF EAIARSLDMA VLLEVHDRPE
LERALARCKT PLVGINNRNL RSFEVSLSTT LDMLADMPPE RLPVTESGIL TPQDVKTLRD
AGVQAFLVGE AFMRAADPGL ALARLFA