| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1202 |
|---|
| Symbol | |
|---|
| ID | 4692431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1335988 |
|---|
| End bp | 1337490 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639848977 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_995991 |
|---|
| Protein GI | 121608184 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CTGTCCCGCG CCAAGTCCTC CAGCCTGAAC TCGCATTGGA GCGGATCAGC
CAAGTCTGGG ATGACGACAT CATTGGCCAA CTCGAGGACT ACATTGCCAT CCCCGCCAAA
TCCCCGATGT TTGCGCCCGA CTGGGCCGAG CAGGGGCTGC TCGACACCGT GGTGCGCAAC
GCCGCCACCT GGGTCGAGGC GCAGCGGGTG CAAGGTTTGC GGCTGGAAAT CCTGCGCCTC
GAAGGCCGCA CACCGGTGCT GTTCTTCGAG ATAGCGGCGA CGCAACCCGG GGCCACCGAC
AGCGTGCTGA TGTACGGCCA TCTGGACAAG CAGCCGGAGT TCTCGGGCTG GCGCAGCGAC
CTCGGCCCCT GGACGCCCAA ATACGAAGAC GGCAAACTCT ACGGCCGCGG CGCCGCAGAC
GACGGCTACG CGGTCTACGC CAGCATTGCC GCAGTGCAGG AACTCAAGCG CCAGAACCTG
CCGCACCCGC GCATCGTGGG CTTGATCGAG ACCTGCGAAG AAAGCGGCTC GCGTGACCTG
CTGCCCTGCA TTGCCGCGCT GCGCGCGCGC ATCGGCGCGG TGGGCCTGGT GGTGTGCCTG
GACTCCGGCG CCGGCAACTA CGAGCAACTG TGGCTGACCA CCAGCCTGCG CGGCATGGCC
AGCGGCACGC TCAAGGTCGA GATACTCAGC GAAGGCGTGC ATTCGGGCGA CGCCTCGGGT
CTGGTGCCCT CGTCGTTGCG CATCATGCGC CAAGTGCTCG ACCGCCTCGA AGACAGCGCC
ACCGGCCGCC TGCTGCCGGC CAGTTTCCAC TGCGAAGTAC CCGCCGAGCG CATCGCACAG
GCCCGCGCCA CGGCCGACAT CCTGGGCGCA GAGGTCTACC AGCGCTTCCC CTGGGCGCAC
TACGACTGCG GCGGCGCCAC CCGCTTTGCG CTGCCCACCA CTACCGACCC GCTGCAAGCG
CTGCTCAAGC GCACCTGGGA GCCTACATTG AGCGTGACCG GGGCCGAGGG TTTTCCGGCC
TTGCAGGACG CGGGCAACGT GCTGCGCCCC TACACCGCCT TCAAGCTCAG CCTGCGTCTG
CCCCCGCTGG TGGACGCCGC CCTGGCCGTG CAGAAACTCA AGGCGCTGCT GGAAGACAAC
GCGCCCTACC AGGCCAAGGT CACCTTCGAG AGCGGCGGCG GCGCCACCGG CTGGAACGCC
CCGGCCACCG CGCCCTGGTT CGAGCAGGCC ATCACCCAAG CCTCGCAGGC CCACTTTGGC
GCGCCCTGCG GCTATGTCGG TCAAGGCGGC ACCATCCCGG TGATGAACAT GCTCAGCCAA
AGCCTGCCCA AGGCCCAGAT GATGGTCTGC GGCGTGCTCG GCCCCAAGAG CAATGCGCAC
GGCCCCAACG AATTCCTGCA CCTGCCCTAC GCCAAGCGCC TCACGGCCTC GGTGGCGCAG
GTGATTGCCG CGATGGCGCA GCAGGCCACC ACACCCGCCA GCCCGCCGGC CACGGCAGGC
TGA
|
|---|
| Protein sequence | MNAPVPRQVL QPELALERIS QVWDDDIIGQ LEDYIAIPAK SPMFAPDWAE QGLLDTVVRN
AATWVEAQRV QGLRLEILRL EGRTPVLFFE IAATQPGATD SVLMYGHLDK QPEFSGWRSD
LGPWTPKYED GKLYGRGAAD DGYAVYASIA AVQELKRQNL PHPRIVGLIE TCEESGSRDL
LPCIAALRAR IGAVGLVVCL DSGAGNYEQL WLTTSLRGMA SGTLKVEILS EGVHSGDASG
LVPSSLRIMR QVLDRLEDSA TGRLLPASFH CEVPAERIAQ ARATADILGA EVYQRFPWAH
YDCGGATRFA LPTTTDPLQA LLKRTWEPTL SVTGAEGFPA LQDAGNVLRP YTAFKLSLRL
PPLVDAALAV QKLKALLEDN APYQAKVTFE SGGGATGWNA PATAPWFEQA ITQASQAHFG
APCGYVGQGG TIPVMNMLSQ SLPKAQMMVC GVLGPKSNAH GPNEFLHLPY AKRLTASVAQ
VIAAMAQQAT TPASPPATAG
|
|---|
| |