Gene Veis_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1201 
Symbol 
ID4693145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1334845 
End bp1335942 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content67% 
IMG OID639848976 
ProductNlpB/DapX family lipoprotein 
Protein accessionYP_995990 
Protein GI121608183 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCTG CTACCACCCG ACCGGGCCTG CTGGCTCTGG CCTTGGCCCT GTCCGCCTGC 
TCCGTCTTCG ATGGCGACAA GATCGACTAC AAAAGCGCCA CCAAAGGCTC GACCCTGGAA
GTTCCGCCAG ACCTGACCCA GTTGCCGAAC GACTCGCGCT ACACCGTGGC AGGCGGCGCC
GTATCGGCCA CCGCCTTGCA GGCCGGCCAG GCGGCGCAGC CTGCGGGCAC GGTCAACGCC
GCAGCGCTGG CACTGGGCGA TGTGCGCATC GAGCGCGACG GCCAGAAACG CTGGCTGGTG
GTCCGCCGCC CCGCTGACCA GCTCTGGGAG CCGGTGCGTG ATTTCTGGCA AGCCAACGGC
TTCACGCTGG CGCAGGCCGA TGCCAATGTC GGAATCATGG AGACCGATTG GGCAGAAAAC
CGCGCCAAGC TGCCCCAGGA CTTCATCCGC TCGACGCTGG GCAAACTGCT CGAATCGCTG
TACTCGACCG GTGAGCGCGA CAAGTTCCGC ACCCGCCTGG AACGCCGCGC CGACAATGGC
ACGGAGATCT ACATCACCCA CCGCGGCTTG ATCGAGGTGT ACGGCTCGGC CTCCAAGGAC
AGCACGGTGT GGCAGCCGCG CCCGTCAGAT CCGGAACTGG AAACCGAGTT TCTGCGCCGC
CTGATGGTCA AACTCGGCAT CAGCCAGGAA CAATCCCGGG CCATCGCCGC CACCTCCGAT
GCCGCCCCAC GCGCACCCTC TGCGCGCATG GCCACGGTCG ATCAGACGCC CGTGGTTCAG
CTCGACGAGG GCTTCGACCG CGCATGGCGT CTGGTGGGAC TGGCGCTGGA CCGCACGGGC
TTTACCGTGG AAGACCGCAA TCGCGCCGAA GGCACCTACT TCGTGCGCTA CGTCGCTCCC
GGCACCGACA AGAAAGAACC CGGCTTCTTC AGCAAGCTGT TTGGCGCGCC CAGCGCAACG
CCGCCCCTGA AATACCGCAT CGTCGTGCGC AGCCAGGGCG AGGCGAGCAC GGTATCGGTG
CTCGATGCCA CCGGCGCGCC CGAAGCGTCG GCCAACGCCG AGCGCATCGT GCGCGTGCTG
GCGGACGAAA TGAAGTGA
 
Protein sequence
MKAATTRPGL LALALALSAC SVFDGDKIDY KSATKGSTLE VPPDLTQLPN DSRYTVAGGA 
VSATALQAGQ AAQPAGTVNA AALALGDVRI ERDGQKRWLV VRRPADQLWE PVRDFWQANG
FTLAQADANV GIMETDWAEN RAKLPQDFIR STLGKLLESL YSTGERDKFR TRLERRADNG
TEIYITHRGL IEVYGSASKD STVWQPRPSD PELETEFLRR LMVKLGISQE QSRAIAATSD
AAPRAPSARM ATVDQTPVVQ LDEGFDRAWR LVGLALDRTG FTVEDRNRAE GTYFVRYVAP
GTDKKEPGFF SKLFGAPSAT PPLKYRIVVR SQGEASTVSV LDATGAPEAS ANAERIVRVL
ADEMK