Gene Veis_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1189 
Symbol 
ID4690991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1322244 
End bp1323041 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID639848964 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_995978 
Protein GI121608171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID[TIGR03239] 2-dehydro-3-deoxyglucarate aldolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA CCACCATTCC CAATTCCTTC CGGCGCGACA TCCTCGCCTG CCGTCGCCTG 
ATCGGATGCT GGTCGTCCCT GACCAGCCAC ATCACCGCCG AAATCCTGGG GCAGGCTGAT
TTCGACTGGA TCTTGCTCGA CAGCGAGCAT GCCCCCAACG ATCTGTCCAC GCTGCTCACC
CAGTTGATGG CGCTCAAGGA CAGCCGCAGC GCCCCGGTCG TGCGCCCGCC GGCCAACGAC
CCCGTGCTCA TCAAGCGGCT GCTGGACATC GGTTTCGTCA ACCTGCTGCT GCCGCTCATC
GAATCGGCCG AAGCGGCGCA GTCGGCGGTG GCCGCCACGC GCTATCCGCC GCTGGGCATC
CGTGGCGTCT CGAACGCGCA GCGCTGCAAC CGCTACGGCG CGCAAACCGA GTACGCGAGC
CAGATACATG ACAACGTTTG CGTGCTGCTG CAAATCGAAA CCCGTGCCGG CATCGAGGCG
CTGGAGCGCA TTTTGCAGGT GCCGGGGGTC GATGGCATCT TCATCGGCCC GGCCGACCTG
TCGGCGGCCC TGGGGCATTT CGGCGACCCC AACCACCGGC AGGTGCAGGC GGCCATTGCC
GACATCCATG CGCGCAGCCG TGCTGCCGGC AAAGCCGTCG GCATCCTCAC GACGGTCGAA
GCCGACGCGC GCCGCTATAT CGAACAGGGC TTCCAGTTCG TTGCGGTCGG AACCGATCAA
GCGCTGTTTC GTGCCGCCAC GCAGGGACTG CGAGATCGCT TCCCATCCGG CGACCCCGGC
GCATTGCCCG CCCGTTGA
 
Protein sequence
MAYTTIPNSF RRDILACRRL IGCWSSLTSH ITAEILGQAD FDWILLDSEH APNDLSTLLT 
QLMALKDSRS APVVRPPAND PVLIKRLLDI GFVNLLLPLI ESAEAAQSAV AATRYPPLGI
RGVSNAQRCN RYGAQTEYAS QIHDNVCVLL QIETRAGIEA LERILQVPGV DGIFIGPADL
SAALGHFGDP NHRQVQAAIA DIHARSRAAG KAVGILTTVE ADARRYIEQG FQFVAVGTDQ
ALFRAATQGL RDRFPSGDPG ALPAR