| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1178 |
|---|
| Symbol | |
|---|
| ID | 4690270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1301909 |
|---|
| End bp | 1303930 |
|---|
| Gene Length | 2022 bp |
|---|
| Protein Length | 673 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639848954 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_995968 |
|---|
| Protein GI | 121608161 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.238689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG GCGTTCGATA TTCGCTATCC GGATTCGCGC ATGCCGATGA CGCTCAGTTG
CTGGGCGAGC TCACCGACGC GGTTGCCTCG ACAGGTATAC AAAGCACACG CACGACCCAG
ATAGAAACGT GGAAGACCCA GGTCGCGCTC CTGAAGCAAT GTGCGTATGC CCTGATCGAG
ATGCACGAGG CCGCCAAAGG CTGGCAAGTG ATCCTTGAGT ATGAACTGCC ACGCCGCCAG
AAGCGCCCCG ATGCGATCTT GCTCGCCGAG GACGTGATCC TTGTAGTCGA GTTCAAGGTC
GGAGCCATGT CTCACGATGC ATCGTCTCGC TGGCAAGTAG AAGATTACTG CTTGAACTTG
CGTGACTTCC ACGGCGGCAG TTCCGGGCGC GCGATCGTGC CGGTGCTTTG TTCCACTGCT
ACGCCGACCG TCATGAGTTC GCCTTTAATT TCGAGCTCCT GTGTCGCGCC CATACGGCTC
ACGAATGCCA ACGGCCTAGC CAGCGTATTG CTGTCGGCCT ACTCGGCGCA GCACGATCCC
AGCGACCGAT CCATTGATCC CGACACATGG GTCGATGCAC CGTACCGTCC GACGCTTTCG
GTCATAGAAG CAGCTGAGCG CCTTTACGAG AACCATGACG TTCGTGAGAT CAGCCACAGC
TACGCCAGCA ACTTGGACGC AACGACGGAC CTGCTTTCGG AAGTGATCAG AGAAGCACGT
GCGCAGAACC GACGGTGCGT ATGCTTCGTC ACCGGTGTTC CAGGCGCCGG GAAAACGTTG
ACTGGGCTCA ACGTCGTCCA CGACCCATCC CTGCGTGTGG AAGGCGGCCC ATCTGGAATC
TTCTTGTCCG GCAACGGCCC CCTGGTCAAG GTCGTGCGAG AGGCTTTGGT GTTGAGCCAG
CAGCGTGCCG GGCGTCGGCG CCAGGACAGC GCCCATGAAG TCTCGACCTT CATCCAGAAC
GTCCACCAAT TCTTGCGCTA TCACCGCGAG CATCCCGCGG CTCTGCCACA CGAGCACGTC
GTCGTCTTCG ACGAGGCCCA ACGTGCATGG GATCGCGAGC AGATGCAGCG CAAGCAAGGG
GTGGACCGTT CGGAGGCTGC CGAACTCTTC GACGTGATGG ATCGACTGGA TGGATGGGCC
GTGATCATTG CTCTCGTCGG CGGCGGACAA GAGATCTTCC TCGGTGAGGC AGGATTGGAG
GAATGGGGGC GAGCCGTCGC CGTTCGGCCC GATTGGCGAG TCGTCGCCTC TCCCGAAGTC
GTCTCCGGAG GTGCCAGCGT ATCCGGACAT CGCTTGTTCA CTGATGGCGT TCCCTCTGGC
ATCGAGTTCC GCCCCGAGCC ATTGGCGCAC CTCAGTGTCG GCGTGCGAAG CTTTCGCGCT
CAACGGTTGG CGGAGTGGGT CGATGCGGTG CTCCTCCTCG ATACCGAACA CGCACGGTCT
CTCGTGCCGG ATCGCCGGGA GTTCCCGCTC CATTTCACTC GTGATCTCGA AGTCGCCAAG
GCGTGGTTGC GAGCCAGGAG TGAACCGGGC TGTGGTCAGC GAGCAGGCCT GATCGCTACA
TCGGAGGATC AACGTCTTCG TGCCTATGGC CTGGAACGCT CCAGTGCCTT CCGGCTGGAT
TACTCGTTCG AGAAGTGGTT CCTGATGCCT CCCGCGGACG TTCGTTCGAG CCATGCTCTC
GAGGTGGCGG CGTCGGAGTT CGAATGCCAA GGGCTCGAGC TCGATTGGGT GGGACTGTGC
TGGGGCGGCG ATTTGACGCC ATCCGCCTCT GGCAGCTGGG AGTACCGCAA GTTTCGCGGC
AGTAGCTGGA ATCAGGTGCG TAGCGATTCG GAACGCACCT ATGTACGCAA TCGCTACCGC
GTGCTGCTCA CGCGTGCGCG TCTCGGCATG GTCATCTGGA TACCTCCGGG TAAGGCAAGC
GACCCGACGC TCGAACCGGA CAGATTCGAC CGGGTTCGGA GTTTGCTTGA GGCAGTCGGC
GTGCCAGAGC TTCGAGAAGA ATTCGAAGGG GCCGAGGCAT GA
|
|---|
| Protein sequence | MSRGVRYSLS GFAHADDAQL LGELTDAVAS TGIQSTRTTQ IETWKTQVAL LKQCAYALIE
MHEAAKGWQV ILEYELPRRQ KRPDAILLAE DVILVVEFKV GAMSHDASSR WQVEDYCLNL
RDFHGGSSGR AIVPVLCSTA TPTVMSSPLI SSSCVAPIRL TNANGLASVL LSAYSAQHDP
SDRSIDPDTW VDAPYRPTLS VIEAAERLYE NHDVREISHS YASNLDATTD LLSEVIREAR
AQNRRCVCFV TGVPGAGKTL TGLNVVHDPS LRVEGGPSGI FLSGNGPLVK VVREALVLSQ
QRAGRRRQDS AHEVSTFIQN VHQFLRYHRE HPAALPHEHV VVFDEAQRAW DREQMQRKQG
VDRSEAAELF DVMDRLDGWA VIIALVGGGQ EIFLGEAGLE EWGRAVAVRP DWRVVASPEV
VSGGASVSGH RLFTDGVPSG IEFRPEPLAH LSVGVRSFRA QRLAEWVDAV LLLDTEHARS
LVPDRREFPL HFTRDLEVAK AWLRARSEPG CGQRAGLIAT SEDQRLRAYG LERSSAFRLD
YSFEKWFLMP PADVRSSHAL EVAASEFECQ GLELDWVGLC WGGDLTPSAS GSWEYRKFRG
SSWNQVRSDS ERTYVRNRYR VLLTRARLGM VIWIPPGKAS DPTLEPDRFD RVRSLLEAVG
VPELREEFEG AEA
|
|---|
| |