| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1172 |
|---|
| Symbol | |
|---|
| ID | 4695092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1293493 |
|---|
| End bp | 1295946 |
|---|
| Gene Length | 2454 bp |
|---|
| Protein Length | 817 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639848948 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_995962 |
|---|
| Protein GI | 121608155 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGT CACGATCGGC CGCGCAACTG CTGTTGCTCG ACGACCCGCA GGAGTGGTCG
GCGTTTGGTC GCCTCCACAG TCCGGCAGCC CCGGCGGGTC CGGCAGATCC GGCAACGGTC
TGGGATTCCC AGGTGGTGCT CGAAGGCATG CACTGCGCCG CCTGCGCCCT CACGATCGAA
GACGCGCTGC GCGCCGTGCC GGGGGTGCTG CAGGCCGATG TCAGCGCCGC CACGCGCCGC
GCCCGCGTGC TGTGGCAGCC CGGGCTGGTG CGCCCGTCGC AGTGGTTGCA GGCCGTGCAC
CAAGCCGGTT ACCGCGCCAT GCCTGCGGTC GATGCCTTGG CGCGCGAGCA GCGCCTGCGC
GCAAGCCGCC AGGCGCTCTG GCGTTGGCTG GTGGCGGGCT TTTGCATGAT GCAGGTGATG
ATGTATGCGT GGCCGGCCTA TGTCGCCGAG CCGGGTGATT TGACCGGCGA GATGGAGCAG
TTGCTGCGCT GGGCGTGCTG GGTCATCAGC CTGGCCGTGG TGGTTTTCTG TTGCGGCCCG
TTCTTTGCCG GCGCGCTGCG CGATATACGC CTGCGCCGGG TCAGCATGGA CCTACCGGTG
GCGCTGGGCA TGGCGATCAC CTTTGGGGTC AGTACTGCGG GCACGTTCGA CCCGAGCGGG
ATTTTCGGCC GGGAGGTGTT CTACGACTCC TTGACCATGT TCGTTTTCTT CCTGCTGACC
GGGCGTTGGC TGGAGTCGCG CCTGCGTGAC CGCACGGCGG GCGCGCTGGA GGCGGTGCTC
AACCGCCTGC CGGACAGCGT GGAGCGGCGC TGTGCCGATG GCAGTTTCAG CCGCGTGGCC
ACGCGCCGTC TGGCCGTGGG CGACACCATC CGCGTGCTGC CGGGTGAGGC GTTTGCGGCG
GACGGGCGCA TCACGCTGGG CAGCACTTGC GCCGATGAGG CCTTGCTGAC CGGCGAGTCC
ACCCCGGTGG CCCGCCCTGT GGGCAGCAAG GTGCTGGCCG GCAGCTACAA CCTGCAATCG
CCCGTGGAGA TGTTGGTCGA GGGCACGGAC GGGCAGACCC GCTGGGCGCA GATCGTGGCC
CTGATGGACA GCGCTGCGCT GCAAAAGCCT CGGCTTGCGC AGTTGGCAGA CCGCATTGCG
CGGCCGTTCC TGGTGCTGGT GCTGGCGGCT GCGGCGTTGG CTGCGCTGCA TGGCTGGTCT
GCCGATCCGG GGCATGCGCT GATGGTGGCG GTGGCGGTGC TGATCGTCAC CTGCCCCTGC
GCCTTGTCGC TGGCCACCCC GGTCGCCATG CTCACCGCTG CGGGCACGCT GGCGCGCCAT
GGCGTGCTGG TGCGCAATCT GCAAGGGCTG GAGGCGCTGG CCCGGGTCGA TACCGTGGTC
TTTGACAAAA CCGGTACGCT GACCCGCGAC GGCATGGCGC TGCGGGCCGT GCACACGGCG
GCTGGCCGGG GGGCTGACGA GGCTTTGGCG CTGGCGGCAG CGCTGGCGCG CCACTCGATG
CACCCCGCAG CGCGTGCCGT GGTGGCGGCG GCTGCGGCGG TGACGGTGGC AGACGGGCGG
TGGCGGCTTG CCGATTGGCA GGAAGAGGCC GGCCTGGGTC TGCGGGCCAC GGTGCAGGAC
GGCGCCGGCG CGGTGCGCAT CGTTCGGCTG GGCTCGGCCC GGCATGCCGG TCTGGCCGCG
CAGCAGGACA GCGGTGCGCC GCAAGTGCTG CTGTCCGAAC AAGGGCCCGA TGGCGCGGTG
CTCGAACTGG CCCGTTTCGA TCTGGTGGAA GACCTGCGCT GCGAAGCTGC TGCCGTGGTG
CAGGCGTTGG AGCGGCAGGG CCTGTCGGTG CAATTGCTCT CGGGTGACCG CATCGGCGCG
GTGCAGCGCG TGGCTGCGCT GGCCGGTATT GCCACGGACC GGGCGCAGGG CGATTGCACG
CCCCAGGGCA AGTTGGCTGC ATTGCAGGCG CTGCAAGCGG GCGGGCGCCA TGTGGCGATG
GTCGGCGATG GCCTGAACGA TGGCCCGGTG CTGGCCGGCG CCGATGTCTC CTTTGCCTTT
GGCCGCGCCG TGCCGCTGGC CCGCTCGCGG GCCGACTTCG TGGTGCTCGG CGACGATCTG
GCGCTGGTCG TGCAGACGCT GCTGCTGGCG CGTCGCACGC TGCGGGTGGT GCGCCAGAAC
CTGTGCTGGG CTGCGCTGTA CAACGCGCTG TGTGTGCCGC TGGCGCTGCT CGGTTGGATG
CCGGCCTGGC TGGCCGGGCT GGGCATGGCG CTGAGTTCGC TGCTGGTGGT GCTCAATGCG
GCGCGGCTCA GCAAGCCCCT GCGATTTGCC GACGGCCCGG CAAAGCCGGT TTCGCGGCGT
CCGCTGGCTT GGGGCGCCGC TGCTGCGCCT GCCGCAGGTG ACGCGGGCGA CGCGCAGCGC
GATGAAAGGC CCCAACCGCC GCCCCCGATG AGGGCCGTGC AGCGCACCTC TTGA
|
|---|
| Protein sequence | MSMSRSAAQL LLLDDPQEWS AFGRLHSPAA PAGPADPATV WDSQVVLEGM HCAACALTIE
DALRAVPGVL QADVSAATRR ARVLWQPGLV RPSQWLQAVH QAGYRAMPAV DALAREQRLR
ASRQALWRWL VAGFCMMQVM MYAWPAYVAE PGDLTGEMEQ LLRWACWVIS LAVVVFCCGP
FFAGALRDIR LRRVSMDLPV ALGMAITFGV STAGTFDPSG IFGREVFYDS LTMFVFFLLT
GRWLESRLRD RTAGALEAVL NRLPDSVERR CADGSFSRVA TRRLAVGDTI RVLPGEAFAA
DGRITLGSTC ADEALLTGES TPVARPVGSK VLAGSYNLQS PVEMLVEGTD GQTRWAQIVA
LMDSAALQKP RLAQLADRIA RPFLVLVLAA AALAALHGWS ADPGHALMVA VAVLIVTCPC
ALSLATPVAM LTAAGTLARH GVLVRNLQGL EALARVDTVV FDKTGTLTRD GMALRAVHTA
AGRGADEALA LAAALARHSM HPAARAVVAA AAAVTVADGR WRLADWQEEA GLGLRATVQD
GAGAVRIVRL GSARHAGLAA QQDSGAPQVL LSEQGPDGAV LELARFDLVE DLRCEAAAVV
QALERQGLSV QLLSGDRIGA VQRVAALAGI ATDRAQGDCT PQGKLAALQA LQAGGRHVAM
VGDGLNDGPV LAGADVSFAF GRAVPLARSR ADFVVLGDDL ALVVQTLLLA RRTLRVVRQN
LCWAALYNAL CVPLALLGWM PAWLAGLGMA LSSLLVVLNA ARLSKPLRFA DGPAKPVSRR
PLAWGAAAAP AAGDAGDAQR DERPQPPPPM RAVQRTS
|
|---|
| |