| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1170 |
|---|
| Symbol | |
|---|
| ID | 4692669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1291810 |
|---|
| End bp | 1293270 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639848946 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit I |
|---|
| Protein accession | YP_995960 |
|---|
| Protein GI | 121608153 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAT CAAGAACAAA TGCTGTCGTC CGCAACGCCA GCGTTGCGCA CTACAACGAC
ACCGTGGTGC GGCAGTTTTC TGTCATGGCC GTGGTTTGGG GGGTGGTTGG CATGCTGGTG
GGCGTCGTCA TCGCCGCCCA GTTGGCCTGG CCTGACCTGA ACTTCGGCAT CCCCTGGCTC
AGCTATGGGC GCCTGCGCCC CCTGCACACC AACGCGGTGA TTTTTGCGTT TGGCGGCTGT
GTGCTGTTTG CCAGCAGCTA CTACGTGGTG CAGCGCACCA GTCAGGTCCG GCTGTTTGCC
GCTCCGCTGG CCGCGTTCAC CTTCTGGGGC TGGCAGTTGG TGATTCTGGC GGCGGCCATC
AGCCTGCCGC TGGGCTACAC CTCCGGCAAG GAATACGCGG AGCTCGAATG GCCCATCGAC
ATCCTGATCA CGCTGATCTG GGTGTCCTAC GCCATCGTGT TCTTTGGCAC CGTCGGCACG
CGCAAGGTTC GGCATATCTA TGTCGCCAAC TGGTTCTTTG GCGCGTTCAT CCTGGCGGTG
GCCTTGCTGC ATGTGGTCAA CAGCGCGGCG ATTCCGGCCG GCCTGATGAA GAGCTACTCG
GCTTACGCCG GGGTGCAGGA TGCGATGGTG CAGTGGTGGT ACGGCCACAA TGCGGTGGGC
TTTTTCCTCA CGGCAGGCTT TCTGGGCATG ATGTATTACT TCGTCCCCAA GCAGGCGGGC
CGTCCGGTGT ACAGCTACCG CCTGTCCATC GTCCACTTCT GGGCGCTGAT CTTTACCTAC
ATGTGGGCCG GCCCGCACCA CCTGCACTAC ACCGCGCTGC CGGACTGGAC GCAATCGCTG
GGCATGGTGT TTTCGCTGAT CCTGCTGGCG CCGAGCTGGG GCGGGATGAT CAACGGCGTG
ATGACCCTGT CGGGTGCCTG GCACAAGCTG CGCGACGATC CCGTTTTGCG CTTCCTGATC
GTGTCGCTGT CGTTCTACGG CATGTCCACT TTCGAGGGGC CGATGATGTC GATCAAGACC
GTCAACGCGC TGAGCCACTA CACCGACTGG ACCGTCGGCC ATGTGCACTC GGGCGCCCTG
GGCTGGGTCG GGCTGATTTC GATGGGTACG CTGTACTACC TGGTGCCGCG CCTGTTCGGC
AAGGACAAGA TGCACTCCAT CAAGGCCATC GAGCTGCATT TCTGGCTGGC CACCATCGGC
ATCGTGCTGT ATATCGCCGC GATGTGGATT GCCGGTGTGA TGCAGGGCCT GATGTGGCGC
GCCGTCAACC CGGACGGCAC GCTCAGCTAC ACCTTTGTCG AAAGCGTCAA AGCCAGCTAC
CCGTTCTACG TGGTCCGCTT GGCCGGTGGC CTGCTGTATC TGGCCGGCAT GCTGGTGATG
GCCTGGAACG TCTGGCTGAC CGCAAGCTCC GGCCGTCCGG TCCGGGTAGC CATTCCTGCC
GTGAACGCGG CGCATGCCTG A
|
|---|
| Protein sequence | MDSSRTNAVV RNASVAHYND TVVRQFSVMA VVWGVVGMLV GVVIAAQLAW PDLNFGIPWL
SYGRLRPLHT NAVIFAFGGC VLFASSYYVV QRTSQVRLFA APLAAFTFWG WQLVILAAAI
SLPLGYTSGK EYAELEWPID ILITLIWVSY AIVFFGTVGT RKVRHIYVAN WFFGAFILAV
ALLHVVNSAA IPAGLMKSYS AYAGVQDAMV QWWYGHNAVG FFLTAGFLGM MYYFVPKQAG
RPVYSYRLSI VHFWALIFTY MWAGPHHLHY TALPDWTQSL GMVFSLILLA PSWGGMINGV
MTLSGAWHKL RDDPVLRFLI VSLSFYGMST FEGPMMSIKT VNALSHYTDW TVGHVHSGAL
GWVGLISMGT LYYLVPRLFG KDKMHSIKAI ELHFWLATIG IVLYIAAMWI AGVMQGLMWR
AVNPDGTLSY TFVESVKASY PFYVVRLAGG LLYLAGMLVM AWNVWLTASS GRPVRVAIPA
VNAAHA
|
|---|
| |