| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1169 |
|---|
| Symbol | |
|---|
| ID | 4694688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 1291155 |
|---|
| End bp | 1291787 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639848945 |
|---|
| Product | cbb3-type cytochrome c oxidase subunit II |
|---|
| Protein accession | YP_995959 |
|---|
| Protein GI | 121608152 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATA ACAAGCCCTC TGCTGCGAGC GGTTTCTCCC ACGAGAAGGT GGAGACCAGC
AACTTCCTGA TGGTCGTGCT GATCCTGCTG GTGATCGCCA TTGGCGGCCT GGTGGAGATC
TTGCCGCTGT TTTTCCAGAA GTCCACGACC GAGGCGGTCA AGGGCGTGCT GCCCTACGAC
GCGATGCAGT TGGCCGGCCG CGACATCTAT ATCCGCGAGG GTTGCTACAA CTGCCACTCG
CAGATGATCC GGCCGTTGCG CGCAGAAACC CTGCGCTATG GCCACTACTC GGTGGCCGGC
GAGTTTGTCT ACGACCACCC GTTCCAGTGG GGCAGCAAGC GCACCGGGCC GGACCTGCAC
CGCGTGGGCG GGCGGTACAG CGATGAATGG CATCGCATCC ACCTGAACAA TCCGCGCGAT
GTGGTGCCCG AGTCGAACAT GCCGGCCTAT CCCTGGCTGG AGAAAACCCC GGTCGATCCG
AGCGTGATGG CACCGCGCAT GAGGGCCTTG CGCACCGTGG GCGTGCCGTA CACCGACGCG
CAGATCGATG CGGCAGCGGC CGAGGTCAAG GGCAAGTCCG AGCAGGAGGC GCTGATTGCC
TACCTGCAAG TCTTGGGCCT GGCGCTCAAA TGA
|
|---|
| Protein sequence | MSDNKPSAAS GFSHEKVETS NFLMVVLILL VIAIGGLVEI LPLFFQKSTT EAVKGVLPYD
AMQLAGRDIY IREGCYNCHS QMIRPLRAET LRYGHYSVAG EFVYDHPFQW GSKRTGPDLH
RVGGRYSDEW HRIHLNNPRD VVPESNMPAY PWLEKTPVDP SVMAPRMRAL RTVGVPYTDA
QIDAAAAEVK GKSEQEALIA YLQVLGLALK
|
|---|
| |