Gene Veis_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1143 
Symbol 
ID4694197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1263109 
End bp1263951 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content63% 
IMG OID639848919 
ProductABC transporter 
Protein accessionYP_995933 
Protein GI121608126 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR01291] ABC-2 type transporter, NodJ family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TGAGCACCCC TGCAAAACCC ACGCTGCAAC CAGGCATCTG GCGCGCACCC 
ATCCTGTCGC TGCGCTTTTG GCCAGTGTTT CAGCGCAACC TGCTGGTCTG GCGCAAACTG
GCCATTCCCA GTCTGGTGGG CAACATCGCC GAGCCGCTGA TGTGGTTGGT GGCCTTTGGC
TACGGCATGG GGGCATTGGT CGGGCACGTC AATGTGGTCG GTGCGCAAGG CGCGCAGCAG
GTGCCCTACA TCCTGTTCCT GGCCAGCGGC GCCATCTGCA TGAGCGCGAT GCAGGCGGCG
TCGTTCGAGG CGCTGTACTC CGCGTTCTCG CGCATGCATG TGCAAAAGAC CTGGGACAGC
ATCCTGAACG CCCCCGTGGG GCTGGACGAC ATCGTGCTGG CCGAGATGTT GTGGGCCGCC
TTCAAGTCGC TGTTTACCGT CACCGCCATT CTTGGCGTGA TGCTGGCGTT GCAGATCAGC
CATTCACCGA AGCTGTTGCT GGCATGGCCC ATCCTGTTGG GCGTGGGCAT CACCTTCAGT
TGCATCGCAC TGGTGTTCAA CGCGCTGGCC AAGGGCTACG ATTTTTTCAC CTACTACTTC
ACGCTGTTTC TCACCCCGAT GATGTTCCTG AGCGGCGTGT TTTTCCCGCT GGAACAACTG
CCCCGGATGC TGCAAGCGGC CGCCAGTTGG CTGCCGCTGT CCAATGCCGT GGCGCTGGTG
CGCCCCTTGT TCATGGACCA ATGGCCGCAG GACGCGGCGC GCCATGCGCT GGTGCTGCTG
GTCTACACCG TGGCGGCGTT CTGGCTGGCG TTGGCACTGA CGCGCAAGCG CTTTCAGCGG
TAG
 
Protein sequence
MTTLSTPAKP TLQPGIWRAP ILSLRFWPVF QRNLLVWRKL AIPSLVGNIA EPLMWLVAFG 
YGMGALVGHV NVVGAQGAQQ VPYILFLASG AICMSAMQAA SFEALYSAFS RMHVQKTWDS
ILNAPVGLDD IVLAEMLWAA FKSLFTVTAI LGVMLALQIS HSPKLLLAWP ILLGVGITFS
CIALVFNALA KGYDFFTYYF TLFLTPMMFL SGVFFPLEQL PRMLQAAASW LPLSNAVALV
RPLFMDQWPQ DAARHALVLL VYTVAAFWLA LALTRKRFQR