| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1134 |
|---|
| Symbol | |
|---|
| ID | 4694478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1254530 |
|---|
| End bp | 1255744 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639848910 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_995924 |
|---|
| Protein GI | 121608117 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTT CGATCAGCGC CACCGACCGG CAGCGGTTGC AGACCTTGCG CCGTCTGGGC
CGCGAAGAAA TGCGGCCGGC GGGCTGGCGC GCCGACCGCG CGGCGGCGCC GTTGCCGGCG
GACGACCCGT TCTTTGCGCG CATGTTGGCC CAGGGGTTCG GGCGCACGCG CTGGCGCCCG
GCCGGCGCGG CCGGCGCGGA CAGCGCGGAC AGCGCGGACA GCGCCGATGC GGCGGCGCCG
AACAAGGCCG CGTCGGCCGT CGCGCAGGTG CTGCTGGCCG AAGAGGGCGC TTACTGGGAC
CGTGGCATTG GCGTCGCGCT GCCCGGCCCC GGCCTGGGCG AGCCGCCGCT GCTCGCGCTG
GGCACGCCCG GGCAGCAGGA GCGCTTTCTC GCGCCCTTCG TCGCCCCGCA GCGGCCGATC
TGGGGCGCTT TCGCGATGAC CGAGCCTTCG GGCGGCTCCG ACGTGGCCAA CATCAAGACC
CGCGCGCGGC GCGATGGCGA TCACTGGGTG CTGAACGGCG CCAAATCCTT CTCGGGCAAT
TCGGGCCGCG CCGAGTGGAT CGTGGTGTTC GCCACCATCG ATCCGGCGCT TGGCCGGGCG
GGTCACCGCG CCTTTGTCGT CGAGCGCGGC ACGCCGGGCC TGGGCGACTT TCGCGTGGAA
AAGAAGATGG GCCTGCGGGC TTACGAGTCG ACCTCGTTCC TGCTGTCCGA TTGCCGCGTG
CCGATGGCCA ACCTGCTCGG CGGCGAGGCC GGCCACGGTC AGCCCACGGG CGGCTTCAAA
GGCGCGATGA ACACCTTCAA CGCCGGGCGG CCGGCGATTG CCGGCATGGC CGTCGGCATG
GGCCGCGCCG CACTCGACGA GGCCATGGCC TGCATGTGCG AGGCCGGCCT GGCGTCCGAG
CAGCGGTTGC GCGACCGGCT CGAACGCTCG CGCCGCAAGC TCAAGGCTGC GCTGCTGCTG
GCGCTGCGCG CCGCCTGGCT GGCCGACCAG CGCCAACCCA ACATGCTGGA GGCATCCGCC
GCCAAGGCCC TGGCGCCACC GGCCGCGTTC GAGGCCGCGA GCTTCGCGAT GGAGGTGCTG
GGCGCCGCCG GCGGGCGTGG CGACCATCTG ATCGAAAAAC TGTTTCGCGA CGTGAAGGCG
CTGGATATCG TCGAGGGCAC GGGCCAGATC CAGCGCGTGG TGATGGCGCG CCACCTCGTC
GGGTTGCCGA ACTGA
|
|---|
| Protein sequence | MDFSISATDR QRLQTLRRLG REEMRPAGWR ADRAAAPLPA DDPFFARMLA QGFGRTRWRP
AGAAGADSAD SADSADAAAP NKAASAVAQV LLAEEGAYWD RGIGVALPGP GLGEPPLLAL
GTPGQQERFL APFVAPQRPI WGAFAMTEPS GGSDVANIKT RARRDGDHWV LNGAKSFSGN
SGRAEWIVVF ATIDPALGRA GHRAFVVERG TPGLGDFRVE KKMGLRAYES TSFLLSDCRV
PMANLLGGEA GHGQPTGGFK GAMNTFNAGR PAIAGMAVGM GRAALDEAMA CMCEAGLASE
QRLRDRLERS RRKLKAALLL ALRAAWLADQ RQPNMLEASA AKALAPPAAF EAASFAMEVL
GAAGGRGDHL IEKLFRDVKA LDIVEGTGQI QRVVMARHLV GLPN
|
|---|
| |