Gene Veis_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1121 
Symbol 
ID4692014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1243698 
End bp1244189 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID639848899 
Productflagellar motor switch protein FliN 
Protein accessionYP_995913 
Protein GI121608106 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.5679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACTG AAGATGGCCC GCCCGGCGCT GGCCAGGGCG CCCCCGCAGA CAACGCGGCG 
GACGACCCGT TCAATGGCTG GGCCGAGGCG CTGAAAGAGC AAAAACGCAG CGACGAGCCG
CCCGCCGAGG GGCAGCAGGG GGGGCCCTTG AGCGGCGAGC CGGTGCGTCC CCCTCTTGCC
GGCGCCGCCA GTGGCGCCAG CGCTGTCAAC GGCGGCGAGC AGGTCATCAA CGACATCAAC
CGGGTGCTGG ACATCCCGGT GCAACTGTCG GTGGAGCTCG GGCGCACCAA GGTGCCGATC
AAATACATAC TGCAACTGGC GCAAGGCTCG GTGGTGGAGC TCGATGCACT GGCCGGCGAG
CCTATGGACG TGCTGGTCAA CGGCTATCTG ATCGCCCAAG GCGAGGTGGT GGTGGTCAAC
GACAAGTTCG GCATCCGCCT GACCGATGTG GTGACGCCCT CCGAGCGCCT GCGGCGCGTC
AGCCGTGGCT AG
 
Protein sequence
MSTEDGPPGA GQGAPADNAA DDPFNGWAEA LKEQKRSDEP PAEGQQGGPL SGEPVRPPLA 
GAASGASAVN GGEQVINDIN RVLDIPVQLS VELGRTKVPI KYILQLAQGS VVELDALAGE
PMDVLVNGYL IAQGEVVVVN DKFGIRLTDV VTPSERLRRV SRG