Gene Veis_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_1112 
Symbol 
ID4692776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp1234822 
End bp1235145 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content64% 
IMG OID639848890 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_995904 
Protein GI121608097 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.213428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTC GCCCCCCGAG CCTTGCCACC CCGCTGACGA GCGCCGGCCT GGCGCGCCGC 
GCCGCCGCGC CACAAGATGC AAGCCAGGCC GTGGGCCAGG AAGCGGGATT TCCCGGCGCC
TTCAAAACCG CACTGCAATC GGTCAGCGCG GCGCAAAGCC GCTCGGCCGA TCTGCAAAAA
CAAGTGCAGT TGGAAGACCC CGCCGTCAGT CTGGAAGAAA CCATGGTCGC CATCCAGAAA
GCCCAGATCG GCTTTCAGGC CGCCTTGAAT GTGCGCAACC GGATGGTGCA GGCCTACACC
GACATCATGA ACATGCAGGT CTGA
 
Protein sequence
MDLRPPSLAT PLTSAGLARR AAAPQDASQA VGQEAGFPGA FKTALQSVSA AQSRSADLQK 
QVQLEDPAVS LEETMVAIQK AQIGFQAALN VRNRMVQAYT DIMNMQV