Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Veis_1092 |
Symbol | |
ID | 4695255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Verminephrobacter eiseniae EF01-2 |
Kingdom | Bacteria |
Replicon accession | NC_008786 |
Strand | - |
Start bp | 1217904 |
End bp | 1218479 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639848872 |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_995886 |
Protein GI | 121608079 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.191867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCTGA TCAATACCCC CATCCAACCC TTCAAGACCA CTGCTTTCAT CCACCGTGGC GGCAAGGGTG AATTCATCGA AGTCACCGAC GACAGCCTCA AGGGCAAGTG GTCGGTGCTG ATTTTCATGC CCGCCGCCTT CACCTTCAAC TGCCCCACCG AAATCGAAGA CGCGGCCGAG CATTACGCCG AGTTCCAGAA GGCCGGCGCC GAGGTCTACA TCGTCACCAC CGACACGCAT TTCTCGCACA AGGTGTGGCA CGAAACCTCG CCAGCCGTCG GCAAGGCCCG GTTCCCCTTG GTCGGCGACC CGACCCACCA ACTGACCCAT GCTTTCGGCG TGCATATTCC GCAAGAGGGC TTGGCGCTGC GCGGCACCTT CATCATCAAC CCCGATGGCC TGATCAAGAC CGCCGAGATC CACTCCAACG AGATCGCCCG CGATGTCAAG GAAACCGTGC GCAAGCTCAA GGCCGCCCAG TACACCGCCG CCAACCCCGG CCAGGTCTGC CCCGCCAAAT GGAACGAAGG CGCCAAGACC CTGACGCCTT CGCTGGACTT GGTCGGCAAG ATCTGA
|
Protein sequence | MSLINTPIQP FKTTAFIHRG GKGEFIEVTD DSLKGKWSVL IFMPAAFTFN CPTEIEDAAE HYAEFQKAGA EVYIVTTDTH FSHKVWHETS PAVGKARFPL VGDPTHQLTH AFGVHIPQEG LALRGTFIIN PDGLIKTAEI HSNEIARDVK ETVRKLKAAQ YTAANPGQVC PAKWNEGAKT LTPSLDLVGK I
|
| |