| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1086 |
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| Symbol | |
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| ID | 4693188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | - |
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| Start bp | 1210820 |
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| End bp | 1211761 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639848866 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_995880 |
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| Protein GI | 121608073 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.199216 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGCA AACAACTATG GCGCATCACC CTGGGCATTG GCATTGCGCT GGGCGCGAGC
CTGGCCGCCA GCGCCCAGCA GGTCTACATA CCGCTGGTGT CCAAGGGCTT TCAGCACCAG
TTCTGGCAAT CCGTGAAGGC CGGGGCGGAG CAGGCGGGCA AGGACTTCGA TGTCAAAGTC
ACGTTCGAGG GGCCAGAGTC GGAAGCGATG ATCGACAAGC AGATCGACAT GCTGGCCGCC
GTTCTGGCCA AGAACCCGAA AGCGATCGGT CTGGCAGCGC TCGACAAAAA GGCCGTGGTC
CCGTTGCTCA AAAAGGCCCA GGCCGCCAAG GTGCTGGTCG TGGCCTTCGA CGCCAGTGTG
GACAGCGACA TCCCGGTGAC CACGGCGAGC ACCGACAACA GGGCTGCGGC CGCATTGGCG
GCAGACAAAA TGGCCGAGTT GATCGGCAAG AGCGGCGAGA TCGCGTTGGT CGTGCATGAC
CAGACCAATA GCACCGGCAT AGACCGCCGT GACGGCTTCG TCGAGCGCAT CAAGACCAGC
TACCCGGGCA TCAAGATCGT CAGCATCCAG TACGGCGGCG GCGACCACCT CAAGTCCACC
GAAATCACCA AGTCCATCCT GCAAGCCAAC CCGAATCTGA AGGGCATCTT CGGCACCAAT
GAAGGCTCGG CCGTGGGCGT GATCAACGGC GTCAAAGAGA TGAAGCGCAA GCTGGTGGTC
ATCGGCTACG ACGCGGGCAA GCAGCAAAAG GATGCGATCA GGGCCGGCCT GATGGCCGGC
GCCATCACGC AAAATCCGGT GGGCATCGGC TACAAGACCG TGGAGGCCGC CGTCAAGGCG
CTCAAGGGCG AGAAGTTGCC CAAGGTGATC GACACCGGCT TTTACTGGTA CGACAAGAAC
AATATCGACG ACCCCAAGAT CGCCGCCGTT TTGTACGATT GA
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| Protein sequence | MSGKQLWRIT LGIGIALGAS LAASAQQVYI PLVSKGFQHQ FWQSVKAGAE QAGKDFDVKV
TFEGPESEAM IDKQIDMLAA VLAKNPKAIG LAALDKKAVV PLLKKAQAAK VLVVAFDASV
DSDIPVTTAS TDNRAAAALA ADKMAELIGK SGEIALVVHD QTNSTGIDRR DGFVERIKTS
YPGIKIVSIQ YGGGDHLKST EITKSILQAN PNLKGIFGTN EGSAVGVING VKEMKRKLVV
IGYDAGKQQK DAIRAGLMAG AITQNPVGIG YKTVEAAVKA LKGEKLPKVI DTGFYWYDKN
NIDDPKIAAV LYD
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