| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1064 |
|---|
| Symbol | gidB |
|---|
| ID | 4694783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1185970 |
|---|
| End bp | 1186689 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639848844 |
|---|
| Product | 16S rRNA methyltransferase GidB |
|---|
| Protein accession | YP_995858 |
|---|
| Protein GI | 121608051 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
|---|
| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.482961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACCA GCCTGGGCAA TGATGTGCTG CGTGCCCGAC TGCAATCGGG GGCCGAGGTG
TTGGCGCCGG GTTTGGACGC TGCGCAGATC GATCGCTTGA TGGATTTTCT GGCGCTGCTG
CAAAAGTGGA ACCGGGTCTA CAACCTGACG GCGTTGCAGG ATCCGCAGGA AATGCTCACG
CAGCATCTGC TCGACAGCCT GGCGGCGCTG GCTCCGTTGC GCCGCCAGTT GGCCCACTTG
GCCCACTTGG CCCATTCGAC CGGTCTGGCC GGGCCGGGGC AGGGCGCCGG GCCTCGGCGC
TTGCTCGATG TGGGTTCGGG CGCTGGCCTG CCGGGCGTGG TGTTTGCCAT CTGCTGCCCG
CAGTTGGATG TGCACTGCGT CGACAGCGTG GGCAAGAAGG CCGCTTTCAT TGGGCAGGTG
GCGTTGCAGC TCAGGCTGCG CAACCTGCAT GGCGTGCACG CGCGGGTCGA AACGCTGACC
ACGCCGTTCG AGATCATCTG CTGCCGCGCG TTTGCAGCGC TGCCCGACTT TGTGCGCTGG
ACGCGGTCTG CGCTGCGGGC GCCCGATGGC GTCTGGTTGG CGCTCAAGGG CAAGCACCCG
GGGGCCGAAA TCGCCGCCCT GCCTGCCGAT GTGCAGGTGT TTCACGTGGA ACGACTGACG
GTTCCGGGGC TTGCCGCCGA GCGCTGCATC GTCTGGCTGC GGCCTGCTGC GCTCGCGTAA
|
|---|
| Protein sequence | MMTSLGNDVL RARLQSGAEV LAPGLDAAQI DRLMDFLALL QKWNRVYNLT ALQDPQEMLT
QHLLDSLAAL APLRRQLAHL AHLAHSTGLA GPGQGAGPRR LLDVGSGAGL PGVVFAICCP
QLDVHCVDSV GKKAAFIGQV ALQLRLRNLH GVHARVETLT TPFEIICCRA FAALPDFVRW
TRSALRAPDG VWLALKGKHP GAEIAALPAD VQVFHVERLT VPGLAAERCI VWLRPAALA
|
|---|
| |