| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1042 |
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| Symbol | |
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| ID | 4691281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Verminephrobacter eiseniae EF01-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008786 |
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| Strand | + |
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| Start bp | 1159255 |
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| End bp | 1161639 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639848821 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_995836 |
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| Protein GI | 121608029 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.889463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATGC AGCAGATCAT TCGGCAGTTG GCCGCAGAAA TCAGGGTTGG GGAACCACAG
GTGCGCGCAG CGGTGGAACT GCTCGACGCG GGTGCCACGG TGCCCTTCAT CGCGCGCTAT
CGCAAGGAGG CGACCGGCAC GCTGGACGAC ATACAACTGC GCGAACTGCA AGCGCGCCTG
GCGTACCTGC GCGAGCTGCA AGAGCGCCGC GTCGCCGTCA GCAAGAGCAT CGCCGAACAG
GGCAAGCTCA CCGACGCGCT GCGCGCCGCG ATCGCCGCCG CGCCCACCAA GCAGGAACTC
GAAGACCTGT ACCTGCCGTA CAAGCAAAAA CGCCGCACCA AGGGCCAGAT CGCGTGCGAA
TCCGGCATCG CGCCGCTGGC CGACAAGCTC TGGGCCGACC CCGGGCTGGA CCCTGCGCAA
GAAGCCCTCG CCTTCATCCG GCCGGCGCAA CTGTCGGCCG ATGGCAAGCC CGAGGCCGAT
TTTTCCACCG TGCCCGCCGT GCTCGACGGG GTGCGCGACA TCCTGGCCGA GCGCTGGGCC
GAAGACGCCC GGCTGGTGCA AAGCCTGCGC GAATGGCTCT GGGCCGATGG CCTGCTGTGC
AGCCGCAAGC TCGACGGCAA GGACGACAAC GACCCGCAAG TGGCCAAGTT CCGCGACTAC
TTCGAATACG ACGAGCCGAT AGGCCGCGTG CCCTCGCACC GCGCGCTGGC CGTATTCCGC
GGGCGCGCAC TGGAGATCCT GCAAGCGCGG CTGGCGCTGC CCGTCGAGCC CGGGCCTGGC
CAGCCCGGCG TCGCCGAAGG CCGGATCGCG CTGCACCTGG GCTGGAGCCA TGCGGGCCGC
CCGGCGGACG ACCTGATCCG CAAATGCGTG ACCTGGGCCT GGCGCGTCAA ACTCAGCCTC
TCGACCGAGC GCGAACTGTT TGCCCGCCTG CGCGAGGAGG CCGAAAAGGT GGCCATCAAA
GTGTTTGCCG ACAACCTGCG CGACCTGCTG CTGGCCGCGC CGGCCGGCCC CCGTGTGGTG
ATGGGGCTGG ACCCGGGCAT CCGCACCGGC GTCAAAGTGG CCGTGGTCGA CACCACCGGC
AAACTGGTGG AAACCGCCAC CGTCTACCCG CACGAGCCGC GCCGCGACTG GGACGGCGCG
CTGCGCACAT TGGCCCGGCT GGCCGAAAAG CAGGGCGTGA GCCTGATCGC CATCGGCAAC
GGCAGCGCCA GCCGCGAGAC CGACAAACTG GCCGCCGACC TGATCGCGCA GGCTGCCGGG
CAAGGCCGCG CGATCGACAA AGTGGTGGTC AGCGAGGCCG GCGCCTCGGT GTACTCGGCC
AGCGAATACG CATCGCAGGA ACTGCCCGAT GTCGACGTCA GCCTGCGTGG CGCCGCCAGC
ATTGCGCGCC GCCTGCAAGA CCCGTTGGCC GAACTGGTCA AGATCGACCC CAAGAGCATA
GGCGTGGGCC AGTACCAGCA CGACGTGAAC CAAAGCGAAC TGGCCCGCAC CCTGGGCACG
GTGGTGGAAG ACTGCGTGAA TGCGGTGGGC GTGGACCTGA ACACCGCCAG CGTGCCCCTG
CTGAGCCGCG TCTCGGGCCT GTCGGCCAGC GTGGCCAAAG CCGTGGTGTG CTGGCGCGAG
GCCCATGGCG CATTCAGGAG CCGCCGGCAA CTGCTGGACG TGGCCGGCCT GGGGGCCAAG
ACCTTTGAGC AGAGCGCGGG CTTTTTGCGC ATCCGTGGCG GCGAGAACCC GCTCGACATG
ACCGGCGTGC ACCCCGAGAC CTACCCGGTG ATCGAGCAGA TCATGGCCCG CACCGGCAAA
CCCGTGGCCG AACTGATGGG CCGCTGCGAC ATGCTCAAGA CGCTCAGGCC GGAACTGTTT
GCCAACGAAA AATTCGGCCT CATCACCGTT CGGGACATCC TGGCCGAACT GGAAAAGCCC
GGCCGCGACC CGCGCCCGGA CTTCAAGGTC GCCCGCTTCA ACGACGGCGT GCAAGACATC
ACGGACTTGA AGGAGGGCAT GGTGCTGGAA GGCACGGTCA GCAACGTGGC CCAGTTCGGC
GCCTTCGTCG ACCTGGGCGT GCACCAGGAC GCGCTGGTGC ATGTGAGCCA ACTGGCGCAC
AAGTTCGTCA ACGACGCCCG CGAAGTGGTC AAGACCGGCG CCATCGTCAA GGTGCGGGTG
CTGGAGGTGG ACCTGCCGCG CAAGCGCATC GCCCTGACGA TGAAGCTCGA CGCCGCGCCA
GCGCGCCCGG CCGGCGAGCG CCATGCGCCG CGCGACAACC GCTATGCAGC GCCAGCGCGC
AACCAGCAAC CGCAGCGCCG TGCGCCCGGG CCGGCGCCGC AGTCGGCGAT GGCCTCGGCA
TTTGCGAAGT TGCAACAGGC CAGGAACAGG TCGCCGGGCG GATAG
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| Protein sequence | MQMQQIIRQL AAEIRVGEPQ VRAAVELLDA GATVPFIARY RKEATGTLDD IQLRELQARL
AYLRELQERR VAVSKSIAEQ GKLTDALRAA IAAAPTKQEL EDLYLPYKQK RRTKGQIACE
SGIAPLADKL WADPGLDPAQ EALAFIRPAQ LSADGKPEAD FSTVPAVLDG VRDILAERWA
EDARLVQSLR EWLWADGLLC SRKLDGKDDN DPQVAKFRDY FEYDEPIGRV PSHRALAVFR
GRALEILQAR LALPVEPGPG QPGVAEGRIA LHLGWSHAGR PADDLIRKCV TWAWRVKLSL
STERELFARL REEAEKVAIK VFADNLRDLL LAAPAGPRVV MGLDPGIRTG VKVAVVDTTG
KLVETATVYP HEPRRDWDGA LRTLARLAEK QGVSLIAIGN GSASRETDKL AADLIAQAAG
QGRAIDKVVV SEAGASVYSA SEYASQELPD VDVSLRGAAS IARRLQDPLA ELVKIDPKSI
GVGQYQHDVN QSELARTLGT VVEDCVNAVG VDLNTASVPL LSRVSGLSAS VAKAVVCWRE
AHGAFRSRRQ LLDVAGLGAK TFEQSAGFLR IRGGENPLDM TGVHPETYPV IEQIMARTGK
PVAELMGRCD MLKTLRPELF ANEKFGLITV RDILAELEKP GRDPRPDFKV ARFNDGVQDI
TDLKEGMVLE GTVSNVAQFG AFVDLGVHQD ALVHVSQLAH KFVNDAREVV KTGAIVKVRV
LEVDLPRKRI ALTMKLDAAP ARPAGERHAP RDNRYAAPAR NQQPQRRAPG PAPQSAMASA
FAKLQQARNR SPGG
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