| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1013 |
|---|
| Symbol | |
|---|
| ID | 4692962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 1125593 |
|---|
| End bp | 1126390 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639848791 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_995808 |
|---|
| Protein GI | 121608001 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGG CCGCGACCAT GATTGCTGCC GTGCTGCGGG CACTGGCTGC AGCCGCGCTG
GCGCTGGCTT TGTTGCCGGC GGCCCGGGCG GCCCTGTTCG AAGATGGCGA GGCGCGCCGG
GCCATACTGG AAATGCGCCA GCGCATCGAT GACCTGCAGC AATCCCGGCA GCGCACAACC
GAAGAACTGC GCAAAGGGGC TGACGAGAAC GCCCAGTTGC GGCGCAGCCT GCTGGACCTG
CAAACGCAGA TCGAAACCCT GCGCGCAGAG CAGGCCAGGC TCAATGGCCA AAACGAGCAA
TTGCGGCGCG ACCTGGGCGA GCTACAGCGC CGACAAAAAG ACATCACCCA AGGGGTCGAC
GAACGGCTGC GCCAGTTCGA GCCGGTCAAG GTGAGCGTCG ATGGCCGTGA GTTTCAGGCC
GACCCGGCAG AAAAGCGCGA TTTCGAGGCC GCTCTGGCGG TCTTTCGCGC GGGCAAATTT
GCCGATGCGG GCTTGGCTTT TTCCAGCTTC GTGAGGCAGT ATCCGCGCAG CGGTTTCATG
CCGTCGGCGC GCTTTTGGCT CGGCAACGCG CAGTACGCGA CCCGGGAGTA CCAGGAGGCC
ATCGTCAACT TCAGGCAACT CCTGTCCGAC ACCCCGGGCC ACGCCCGGGC GCCCGAAGCC
GCCTTGTCGA TCGCCAACTG CCAGATGGAG CTCAAAGACA CCCGCAGCGC ACGCAAAACG
CTGGAAGACC TGCTGCAAGC CTATCCGCAA TCGGAGGCTG CGCTGGCCGC CAAAGAGCGC
TTGGCCTACT TGAAATAA
|
|---|
| Protein sequence | MMPAATMIAA VLRALAAAAL ALALLPAARA ALFEDGEARR AILEMRQRID DLQQSRQRTT
EELRKGADEN AQLRRSLLDL QTQIETLRAE QARLNGQNEQ LRRDLGELQR RQKDITQGVD
ERLRQFEPVK VSVDGREFQA DPAEKRDFEA ALAVFRAGKF ADAGLAFSSF VRQYPRSGFM
PSARFWLGNA QYATREYQEA IVNFRQLLSD TPGHARAPEA ALSIANCQME LKDTRSARKT
LEDLLQAYPQ SEAALAAKER LAYLK
|
|---|
| |